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SCNpilot_cont_300_bf_scaffold_180_curated_9

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6088..7077

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JYG1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 329.0
  • Bit_score: 581
  • Evalue 5.70e-163
Uncharacterized protein {ECO:0000313|EMBL:EJL72925.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 329.0
  • Bit_score: 581
  • Evalue 8.10e-163
putative Bug-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 329.0
  • Bit_score: 580
  • Evalue 4.00e-163

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGGACCTCGCCATCTCCCGCCGCCGCTTCGGCCTGCTGCTCTCCGCCTCCGCCGTGCTCGGCGTTCATGCGCGCGTCTTCGCCCAGGACGCCTGGCCCGACCGCCCCATCAAGCTCGTCGTGCCCTTCCCGCCGGGCGGCGGCACCGACCTGGTGGCGCGCGCGATGGGGCAGACCCTGTCGGAGCGGCTCGGGCAACCCATCGTGGTCGACAACCGGCCCGGCGCCGCCACCGTCATCGGCACCGACGCGGTCGCCAAGGCCGCGCCCGACGGCTACACGCTGCTGCTCTCGGGCTCGACCAGCTACAGCGTGAACCCGGCGCTGCGCGCGAAGCTGCCGTACGACCCGGTGCGTGACCTGGCGCCCATCGCCATCGTGGCGCGCACGCCGCTGGTGCTGGTGGTGGGCAAGGGCACGCCGTGGCACTCGGTACCGGAACTGGTCGCTGCGGCCAAGGCCAGGCCCAGGAGCATCCGCTACGCCACATTCGGCTCGGGTTCGGGCCCGCACCTGGCGGGCGAGTTGTTCGCGCTGGCGGCCGGCATCCAGCTGCAAGATATTCCATACAAGGGCAGCAGCCAGAGTTCGATGGCGGTGATCGGCGGCGAGATCGAGGTGGGCATCGACACCGTGGCCGCCGTGGCGCCGCATGTGCGCGCGGGCAAGCTGCGCGCGCTGGGCATCGTGGGCGCCGCGCGTTCCAGCATGCTGCCCGAGGTGCGCACGCTCGCCGAGCAGGGCCTGCCCGACGCGACCTTCGACGCCTGGTACGGCTTCGCGGCACCCGCGCGCACCCCGGCGCCGGTGGTCGACAAGCTGGCCCGCGCGGTCACGGCCACCATGGCCAACGCGCCGCTGCAGGCGCAACTGCGCGCGCAGGGCATGGAGCCGGTGGCCATCGGCGCGGCCGCCTTCCGCACGCAGATGGAGGGCGAGATTTCGCGCTACCGCGCGCTGGCGCATCGCGCGGGGATTACAGCCGAGTAG
PROTEIN sequence
Length: 330
MDLAISRRRFGLLLSASAVLGVHARVFAQDAWPDRPIKLVVPFPPGGGTDLVARAMGQTLSERLGQPIVVDNRPGAATVIGTDAVAKAAPDGYTLLLSGSTSYSVNPALRAKLPYDPVRDLAPIAIVARTPLVLVVGKGTPWHSVPELVAAAKARPRSIRYATFGSGSGPHLAGELFALAAGIQLQDIPYKGSSQSSMAVIGGEIEVGIDTVAAVAPHVRAGKLRALGIVGAARSSMLPEVRTLAEQGLPDATFDAWYGFAAPARTPAPVVDKLARAVTATMANAPLQAQLRAQGMEPVAIGAAAFRTQMEGEISRYRALAHRAGITAE*