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SCNpilot_cont_300_bf_scaffold_180_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 15792..16745

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036303EF similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 318.0
  • Bit_score: 577
  • Evalue 1.00e-161
Transcriptional regulator {ECO:0000313|EMBL:EJL72932.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 319.0
  • Bit_score: 577
  • Evalue 1.50e-161
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 318.0
  • Bit_score: 559
  • Evalue 5.40e-157

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGCCGCCTTGCCCCTGCGCGCGCTCACGCTGCGCCAGCTGCAGTTCTTCTCGGTGCTGGTGGAAGAAGGCCAGTTCGGCCGGGCTGCCAGGCGGCTTTCCATCACGCAGCCGGCCCTGAGCAACGCCATCAAGCAGATGGAGAAGCTGCTGGGCGCCGAGCTGCTGACCCGCTCCACCCACCGGCTGGAGCTCACGCCCGTGGGCGCCGAGGTGCTGGCGCGCACCGATTTCCTGGTCAACACCTTCGAAGTGGCGCTGCGCGACATCGAGAGCACGGTGCAGCGCGGCCGGGCCTTCGTGCGCGTGGGCGTCATCCCTTCGGCCAGCGCGCGCGTGGCGGCAGCCGCCAGCGAGTTCCTGCAAAGCGGGGAGCGCGAGGTGGAGCTGGCCTGGCGCGACGCGCCATCGAACACCTTGCTGGCCGAGCTGCGCAGCGGGCAACTCGACATGGCGGTGGCGGCCATCACCGAGCCGCCGGGCGGGCTGACCTGCATCGACCTGTTCCGCGACCCGCTGGTGCTGGTGGTGCGGCGCGACCATGCGCTGGCGGCCGCCGGCGACGCCAATTGGGAGGCCATCGGCAAGGAGCGGCTGGTGCTGTTCGAAAGCGGCAGCATGCCCGCCCTGGGCAACCCGGCGCGCGCACAGTTCGCGCAAGGCGCGGAGCCCTACCGCGTGAGCTACTCGGAAACGCTCTATGCGCTGGTGCGCAGCGGGCAGGCGCTGGGGCTGATGCCGCGCCTGTACACCTCTTCGCTGCGCGACCCCGAACTGGCCGTGGTGCCGCTGTTGAAGCCGCGCGTCGAGCGCCGCGTGGTGCTGGCCTACCTGCCGGGGCCGATGCGCAACGTGGTGGCGCAGGAGCTGATCGCGTTCCTGCGCGACAGGCTTCCGCAGGCCGGCGAGGCGACGGTGCGGCGCGTGAGCAAGGCGCAGCGGGCGCGGCGCTGA
PROTEIN sequence
Length: 318
MAALPLRALTLRQLQFFSVLVEEGQFGRAARRLSITQPALSNAIKQMEKLLGAELLTRSTHRLELTPVGAEVLARTDFLVNTFEVALRDIESTVQRGRAFVRVGVIPSASARVAAAASEFLQSGEREVELAWRDAPSNTLLAELRSGQLDMAVAAITEPPGGLTCIDLFRDPLVLVVRRDHALAAAGDANWEAIGKERLVLFESGSMPALGNPARAQFAQGAEPYRVSYSETLYALVRSGQALGLMPRLYTSSLRDPELAVVPLLKPRVERRVVLAYLPGPMRNVVAQELIAFLRDRLPQAGEATVRRVSKAQRARR*