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SCNpilot_cont_300_bf_scaffold_180_curated_20

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(17386..18279)

Top 3 Functional Annotations

Value Algorithm Source
universal stress protein UspA n=1 Tax=Variovorax paradoxus RepID=UPI00035E004A similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 296.0
  • Bit_score: 494
  • Evalue 8.30e-137
UspA domain protein similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 294.0
  • Bit_score: 243
  • Evalue 1.10e-61
UspA domain protein {ECO:0000313|EMBL:ACS22590.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 294.0
  • Bit_score: 243
  • Evalue 4.70e-61

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGAACATCCAATCGATCCTGGCGGTGACGGACCTCTCGGCGCACGGCCTGCGCACTGTGGTGCGTGCAGCCAACATCGCGGCGGCGCACGGCGCGCTGCTGAAGATCATGTACGCGCCGGCCGCCTTCGCCGGCCCGGCGGATGCCGATGCGGCCAGCAGCCTCGGCGCCGTGTGCCTGGAAGTGGCCGAGCGCTTCGGCATCCTCGTCAAGAAGATCGACGACACGCGCGGGCAGCTCGAAGGCGCCGCGCAGGAGGCGCGGTGGTGCGACCTCGTGGTGATCGGCGACGAGCCCGACCGTTCGGTCGCCGCCTTCTTCCACGGCCAGCCGGCCGAACGGCTGCTGCGGGCGGCGCAGCGGCCGGTGCTGGTGGCGCGGCTCGATGCGCGAAGCGGCGGCTACGGGCGCATCCTCGTGGCCGTCGATCTCATGGAGGAATCGCGCCCCCTGGTCGACCTGGCCTGCGCCTTCGACGGCCAGGCCGACATCGAGCTGTTCCACGCCTTCACGGCCATGCACGAAGGCAAACTGCGCTATGCGGACGTGTCTTCGCACGTGATCGACGCCTACCGCCACGCCTGCGCGCGCCATGCGCGCGAACGCATGCTGTGGCTGTCCGATGCGTCGAGCGCGCGCCGCAACCGCGTGGTGTCGTCGATCGGTCGCGGCGACCCGGCGCGGCAGGCGGCCGTGCAGCAGCAGTACACGAAGGCCGACCTGCTGGTGGTCGGCAAGCGCAGGCGCTCGGCGCTGATGGACTTTCTTTTCGGCAGCGTGGCGCTGCGCGTGCTGCGCTGGTCCACGGGCGACGTGCTGGTGGTGCCGCACGCCGCGCTTGCCGGCTGGCAGGCGCAGCGCACCGCGGCGCTGGCGCAACGGGGCGCGGCATGA
PROTEIN sequence
Length: 298
MNIQSILAVTDLSAHGLRTVVRAANIAAAHGALLKIMYAPAAFAGPADADAASSLGAVCLEVAERFGILVKKIDDTRGQLEGAAQEARWCDLVVIGDEPDRSVAAFFHGQPAERLLRAAQRPVLVARLDARSGGYGRILVAVDLMEESRPLVDLACAFDGQADIELFHAFTAMHEGKLRYADVSSHVIDAYRHACARHARERMLWLSDASSARRNRVVSSIGRGDPARQAAVQQQYTKADLLVVGKRRRSALMDFLFGSVALRVLRWSTGDVLVVPHAALAGWQAQRTAALAQRGAA*