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SCNpilot_cont_300_bf_scaffold_180_curated_24

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(20951..21592)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035DC513 similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 208.0
  • Bit_score: 388
  • Evalue 6.00e-105
Variovorax paradoxus strain MEDvA23 contig_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33702.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 205.0
  • Bit_score: 367
  • Evalue 1.20e-98
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 200.0
  • Bit_score: 362
  • Evalue 8.60e-98

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGACGGCGATGCCGACCACCACGCCGGTCTTCCGGCAGGCGCTCGGCCCCGCGTGGGAGCGGCTGGGCGAGGTCATCCGCCGCCACTACGCGATGGCGCCGTTCTCCGACGACCACGTGTGCGTGCGCGGCACCATGAGCGAGGTCTGGCACGCGCCCTGGGCCGCGCTGCTGATGCCTTTCGGCCGGCTGTTCGGCGCGCTCGTGCCGCACCAGGGCAAGGACGTGCCGATCGAAGTGCACTACCGATGCCGCCCCGACAACGCCACGCTCTACTGGAACCGCGTCTTCAGTTTCCCCGGCAGGCCGCCCTTTCATTTCCGCTCGCACATGGAACACGACGCGCGCCGGGGCAGCGAGGTGATCGAGTACGTGCGCTTCGGCATCGGCATGCGACTGGCGGTGAGCGCGGAAGACGGCGCGCTCGTGTTCCGCGACCGGGGCTACGTCTGGCGCGTGGCCGGGCTGCGCATTCCGCTGCCGCTGGGGCTCCTGCTGGGCACCGCCTACGTCGAGGAACGCCCCGACCCGCGGGATGCCGACCACTTCACCATGAAGATGCTGCTGCGCCACCGCTGGTTCGGCGACGTGTTCCGCTACAGCGGGCGCTTTCACCTGGAACCGCGCTTGGGTCCACAATGA
PROTEIN sequence
Length: 214
MTAMPTTTPVFRQALGPAWERLGEVIRRHYAMAPFSDDHVCVRGTMSEVWHAPWAALLMPFGRLFGALVPHQGKDVPIEVHYRCRPDNATLYWNRVFSFPGRPPFHFRSHMEHDARRGSEVIEYVRFGIGMRLAVSAEDGALVFRDRGYVWRVAGLRIPLPLGLLLGTAYVEERPDPRDADHFTMKMLLRHRWFGDVFRYSGRFHLEPRLGPQ*