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SCNpilot_cont_300_bf_scaffold_180_curated_30

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(25903..26868)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, LysR family n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R8Q8_CUPTR similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 289.0
  • Bit_score: 265
  • Evalue 5.20e-68
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG23098.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 310.0
  • Bit_score: 349
  • Evalue 5.00e-93
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 289.0
  • Bit_score: 265
  • Evalue 1.60e-68

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Taxonomy

Cupriavidus basilensis → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGGATCTGAGACAACTGCGCCAATTCCTGGCACTCGCGGAAACCGGCAGCTTCAGCGTTGCGGCCGAGCGGCTGCATATGGCGCAGCCGCCGCTGTCGGTGGCCATCCGCAAGCTGGAAGAAGAACTGGGCACGATGCTCTTCGTGCGCAGCTCGCGCGGCGTGCGGCTCACGGCCGCGGGCGATGCTGCCCTGAAGGCGGCACGCGAATGCCTGGACGCTGCCACGCACATCAAGGCCGCGGTGCAACTCGCGGTAGCAGGCGAGTCCGGCAAGCTGGCCATCGGGTTCAGCGGTTCGGTCACGCTGCGCCTGCTGCCGCGGCTGGTGCAGGCGTTCAGGCTGCGCCATCCCGCGGTTCACCTCGACCTGAAGGAAGGCACGAACCTGGAGCTGCTTTCGCGCGTGGAGGCGGGCACGCTCGACCTGGGCTTCGTGCGCTTTCCCACCAACCGGCCACCCGAGCTGCGCTTCCAGATGGTCGAGGAAGACCGCTTCTGCCTGGCGCTGCCGCGCGGCCATGCGCTCGCGCGCAAGCCGGCCGTGGCGCTGGCGGCGCTGGAGGGGCAACCCTTCATCGGCTACGCCCCCTCGCCCGTCGGCGGGCTTCACGCGGCGGTCAGCCTGGTGTTCCAGCGTGCGGGCGTGGCCCCGCGCATCACGCAGGAGGCCATCCAGGTGCAGACGGCGCTGGGCCTGGTCGCAAGCGGCCTGGGCATGGCACTGGTACCGGCAGCCAACACGCCCTATCAACGATCCCTGGGAGCGGTGTTCAGGCCGATCCTCGACCTGCCGGAAGACGCGCGCATCGGTATTGCGCTGGCCTACCGGGCCAACACGGAGAACCCGGCGCTGAAGCGCTTTCTGGAAATCACCATCGAAAAAACCGAGGGCGTGGCAGCGCCGGTGGACGACGCTAGAACAGGCTCCCTTGCCCCACCACGCCGGGCGGCCGGAAAGAAGTGA
PROTEIN sequence
Length: 322
MDLRQLRQFLALAETGSFSVAAERLHMAQPPLSVAIRKLEEELGTMLFVRSSRGVRLTAAGDAALKAARECLDAATHIKAAVQLAVAGESGKLAIGFSGSVTLRLLPRLVQAFRLRHPAVHLDLKEGTNLELLSRVEAGTLDLGFVRFPTNRPPELRFQMVEEDRFCLALPRGHALARKPAVALAALEGQPFIGYAPSPVGGLHAAVSLVFQRAGVAPRITQEAIQVQTALGLVASGLGMALVPAANTPYQRSLGAVFRPILDLPEDARIGIALAYRANTENPALKRFLEITIEKTEGVAAPVDDARTGSLAPPRRAAGKK*