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SCNpilot_cont_300_bf_scaffold_180_curated_43

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(42610..44346)

Top 3 Functional Annotations

Value Algorithm Source
Signal peptide protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RSB8_9RALS similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 581.0
  • Bit_score: 443
  • Evalue 2.50e-121
Uncharacterized protein {ECO:0000313|EMBL:KIV66043.1}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 565.0
  • Bit_score: 450
  • Evalue 4.90e-123
signal peptide protein similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 591.0
  • Bit_score: 441
  • Evalue 5.10e-121

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Taxonomy

Pseudomonas sp. FeS53a → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGAAAGCCGAAGCGGCCCGGGTGCTTGCGCGACTGAAGGCGTTCGGCGCCGGCGCGTTCGCGTGCGCGGCCGCGCTGGCGCTGCCGGCTTTCCCGTCATCGGCGGCTTCGCCTGCGACGGCGTCGCCGCGCCTGGCCTGGCTCACCGACGAAGGCATGGTCGCGGTCGAACGCACGCCGCGCGGCACCGCGCCCCTGCCGCAAGAGGGCGACGCGCTGCAGACGCCGCTGGGCAGCGTATGGAAGCTCTTCGTCTACAGCTACCTGAGCGTCAACGCCACGCAGGAGCCCGTCTACCGCTGCGCCAGCATGCAGCGCCGCACCGACGACGAATACTGCTGCGACCCGGGCGGCAGCATCGGGCGTGAACAGGCGCTGGCCCAGTCCTGCGGACCCTATTTCGACCCGTCGCGCGTCGGCGTCAACGCCGCCGACTGGACCCGCTTCTGGCGCGACAGCGACGCCCCCGCCTGGCTGCGGCGCCTGGACGCCATGAAGCCCGAGACGCGCGTGCCCGTGTCCGAGCTGCTGTCCGCGCTGCGCCAGATTCCCGCTCCCGCCCGCACCGCCGCGCGCCAGGCCCTGCAGCCCGTCACGGTGCGCGACGACGAGGTGCTTGCCGCCCTGGGTGGCGGCCCGCGCTTCAAGACCTGGTCATGGCGGGAAGGTACGCAACCGGTGGGCGGCGCCGCCGGCTGGCTGGCAGACGGCACGCCGTTCTGGTTCGGCGACACCGGCACCAGTCGCAGCGCGCTGCGCGCCCAGGCGAAATGGATGGCCGGGCAATGGGCCGCGCACGGCCTGGCGTCGCCGGCGCCGGATGCGGCGGCGCTCGGCGCGCAGCCCTGCATCGCCGTCGATTTCTTCCAGCGCTATCCCATCGCCACCGTGCAGCGCGCGCTGCCGGGCAACACCGCCGCCGCGCCGGCCGGCCCGTTGCGCGGGCGCTACCGCATCGCCTTCCAGAACGGCTCGCAGTTGGTGATGGAAGGCGTGCCCGCCCAGGTGCTGCGCTACGGCTCGGACGGCCCGCGCATCGCCGCGCGCCTGCCGCTGGAGGACTACGTGGCGCGCGTGGTCGACCGCGAAGGCGACGCGCGCGAAACCGAAGCCGCCCGCGCGCTCGCGGTGGCGGCGCGCAGCTACGTGCTGCAGAACGCGAGCGAAATCGAAGGCTGCCGCCAGATTGCCGACGACAGCCGCACGCAGCGCGTCGGCCCCAATCCGCCGACCGCAGCGGCGCGCGCCGCTGCGGCCTTCACCGAAGGCCTGGTGATCGACGGCCAGGCCGTCAACTACCACAGCGACCGGGCCTCGCCCGGCGTCATGTCGTGGCAAGGCGCGGTCGCCGCAAGCCGCGAGGGCCAGCCCTTCGGCGCCATCCTGCGCACCGCGTACCCGCGCGGCACGCTGGCACCGTTCCGGGCAGAAGCCGACTGCACGCCCCTGCCCGAAGCCCAGCGGTGGCTGGCCGACCGCCAGCGGCGCTGGCGCCAGGTGCTGCGCGCCCAGGCGGGCTTCCAGCCGGTCGACGACACGCTGCGCGTGTGCCTGCTCGCCATGGGCGTTCCGCATTCCGATCAACGCCGCCTGGTGATCCGGGTGCGCGAGTGGCACAGCCGCGAGGGCCGCGTGACGCTCATCCACGAATACCTGCACCTGGCGTTTCGCGACCATCCCCACGGGCAGGACGAAATCTTCATCGAACGGCTTGCGCAGCAACTGGCAGACTCATGA
PROTEIN sequence
Length: 579
MKAEAARVLARLKAFGAGAFACAAALALPAFPSSAASPATASPRLAWLTDEGMVAVERTPRGTAPLPQEGDALQTPLGSVWKLFVYSYLSVNATQEPVYRCASMQRRTDDEYCCDPGGSIGREQALAQSCGPYFDPSRVGVNAADWTRFWRDSDAPAWLRRLDAMKPETRVPVSELLSALRQIPAPARTAARQALQPVTVRDDEVLAALGGGPRFKTWSWREGTQPVGGAAGWLADGTPFWFGDTGTSRSALRAQAKWMAGQWAAHGLASPAPDAAALGAQPCIAVDFFQRYPIATVQRALPGNTAAAPAGPLRGRYRIAFQNGSQLVMEGVPAQVLRYGSDGPRIAARLPLEDYVARVVDREGDARETEAARALAVAARSYVLQNASEIEGCRQIADDSRTQRVGPNPPTAAARAAAAFTEGLVIDGQAVNYHSDRASPGVMSWQGAVAASREGQPFGAILRTAYPRGTLAPFRAEADCTPLPEAQRWLADRQRRWRQVLRAQAGFQPVDDTLRVCLLAMGVPHSDQRRLVIRVREWHSREGRVTLIHEYLHLAFRDHPHGQDEIFIERLAQQLADS*