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SCNpilot_cont_300_bf_scaffold_948_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(6534..6773)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000373E9BA similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 77.0
  • Bit_score: 87
  • Evalue 4.80e-15
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26801.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 79.0
  • Bit_score: 86
  • Evalue 2.00e-14
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 76.0
  • Bit_score: 85
  • Evalue 9.90e-15

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGAACTCCCGACACCAGGTTCCTTCCGATCCGGCTTTCAGCGAGGCCTGGCGACTCTTTCGCGAGCTGCATGACGCGCCCTCGCTCGAACGCGCGGAGAAGCTGGTCCTGTGGCTGGGGCGCGATGCGAAACATGTGCGCGCGCTCGACGAGGCGTTGACCCTCTGGGCGCTGGCCGGTGCGGCGATGGTCGGTTCCGCTCCCGGCGACGAGTCCCGGCAGGAGCCGACGCTGCAATAG
PROTEIN sequence
Length: 80
MNSRHQVPSDPAFSEAWRLFRELHDAPSLERAEKLVLWLGRDAKHVRALDEALTLWALAGAAMVGSAPGDESRQEPTLQ*