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SCNpilot_cont_300_bf_scaffold_1515_curated_9

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(8666..10057)

Top 3 Functional Annotations

Value Algorithm Source
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J3CKJ5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 461.0
  • Bit_score: 827
  • Evalue 8.50e-237
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJL73391.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 461.0
  • Bit_score: 827
  • Evalue 1.20e-236
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 460.0
  • Bit_score: 801
  • Evalue 1.20e-229

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
ATGAATGCGAGCGAAGCTCTGGCCGGCATCTGGCGGCACGCGGGCCTGCCCGAGGAAGCCTTGTCTTTTGCGCGGCTCACCGGCGCCGATCCGGTGCTGCCGTCGTCCTTCGCGGTCGGCACCGCGGCGCAGAGCACCGTCGCGGCGGCGGCGCTGGCCGCCTGCGAGCTGGGGCACCTGCGCGGCACCGGGCGGCAGCAGGTCGGTGTCGACATGCTGCACGCGGCGCTGGAATGCATCGGCTGGTTCAGCCTCGACGGACAGGTACCGGATCAATGGGATGCGTTCTCGGGGCTCTATCGCTGCGTCGACGGATGGGTGCGCGTGCATGCGAATTTCGCGCATCACCGCGACGGCGCGCTGCGGCTGATGAAGCTCGATCCGGCAACGGCCACGCGCGCTGATGCCGAGGCCGTCATGGCCACTTGGCGCGCCCGCGAGTTCGAGGACGCGGCTGCCGCAGCAGGGCTGGTCGCGACGGCACTGCGGCGCTTCGACGAGTGGGACGCCACGCCGCAAGGGCAGGCTGTCGCGGCGCAGCCCCTTTTCACCATCGAGCGCATCGGCGACGCGCCGCCGCTCGTGCTGGCGCCGCTGCGCGAAGACCAGCGGCCGCTGTCTGGCCTGCGCGTGCTCGACCTGACGCGCGTGCTGGCCGGTCCGGTGGGCGGACGCGCGCTCGCGGCCTACGGCGCCGACGTGATGCTCGTGAATTCACCGCAGTTGCCGAACATCGCCGCGATCGCCGATACCAGCCGCGGCAAGCTGTCGGCGCATGCCGACCTGCGGACCGAAGAAGGCCGGGCGGCGCTTCAACGGCTGGTTGCCGATGCGCATGTATTCGTTCAGGGCTATCGGCCGGGCGGGATCGAGTCCCTGGGCTTCGGACCGGCGGCGTTGGCAGAGCAGCGACCGGGCATCGTGTGCGTGTCGCTGAGCGCTTACGGCACGCAGGGGCCATGGGCGAGCCGGCGGGGTTTCGATTCGCTGGTGCAGACCGCGATGGGGTTCAACCACGCCGAAGGCGAGGCCGCCGGGGACGGCAAGCCGAAGCCGCTGCCCATGCAGATCCTCGACGAGGCGACCGGTTACCTGATCGCTTTCGGCGCCGCCGCGGCGCTGTGGCGGCAGCAGCGCGAAGGCGGCAGCTGGCATGTGCGGGTGTCGCTGGCGCAGACGGGGCATTGGCTGCGCGGCCTGGGGCGTGTGCCAGGAGGGCTTTCCATCGCCAAGCCCAGCCTTGCGCCCTACATCGAGACCACCGCCTCGGGCTTCGGCGAACTGGCGGCGTTGCGCCATAGCGCGATGCTTCAGCGAACGCCCGCCGCGTGGCCGCGTCCCTCGATGCCACCGGGCAGCCATGTGGCGCTCTGGCCGGCTGTCATGGAATGA
PROTEIN sequence
Length: 464
MNASEALAGIWRHAGLPEEALSFARLTGADPVLPSSFAVGTAAQSTVAAAALAACELGHLRGTGRQQVGVDMLHAALECIGWFSLDGQVPDQWDAFSGLYRCVDGWVRVHANFAHHRDGALRLMKLDPATATRADAEAVMATWRAREFEDAAAAAGLVATALRRFDEWDATPQGQAVAAQPLFTIERIGDAPPLVLAPLREDQRPLSGLRVLDLTRVLAGPVGGRALAAYGADVMLVNSPQLPNIAAIADTSRGKLSAHADLRTEEGRAALQRLVADAHVFVQGYRPGGIESLGFGPAALAEQRPGIVCVSLSAYGTQGPWASRRGFDSLVQTAMGFNHAEGEAAGDGKPKPLPMQILDEATGYLIAFGAAAALWRQQREGGSWHVRVSLAQTGHWLRGLGRVPGGLSIAKPSLAPYIETTASGFGELAALRHSAMLQRTPAAWPRPSMPPGSHVALWPAVME*