ggKbase home page

SCNpilot_cont_300_bf_scaffold_83_curated_33

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 30450..31442

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036AC489 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 331.0
  • Bit_score: 600
  • Evalue 1.20e-168
putative Bug-like extra cytoplasmic solute receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 323.0
  • Bit_score: 590
  • Evalue 3.90e-166
Putative Bug-like extra cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU49062.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 323.0
  • Bit_score: 590
  • Evalue 1.70e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGAAGTTCTTTGCCAGCACTGCACGCACCACCGTCCTTGCCTCGCTGACATGCATCGCCGCCCTGCTGCCGGGCATGGCCTTCGCGCAGAACGGCTATCCGGCCAAGCCGATCCGCGTGATCGTGCCCTTCGCGGCCGGAAGCACCACCGACATCATTGCCCGCGCCATCGCCGACAAGATGGGCGCGAGCATGGGCCAGGTGCTGGTCATCGACAACCGCGGCGGCGCCAGCGGCACCATCGGCCAGCAGGCAGTGGCCACGGCCGCGCCCGACGGCTACACGCTGATGATTCATTCGTCGTCGCACACGGTCAGCCCCTCCACCTTCGCCAAGCTGCCCTTCGACACGGTGCACGACTTCGCAGGCGTCACGCCGATCTCTTCGCTGCCCAACGCACTGGTGATCGCGCCCTCGAAGAACATCAAGACGCTGCCGCAGCTTCTGGCCGCCGCGCGCGCCAAGCCTGGCAGCATGAACTTCGCTTCTGCCGGCCAGGGCAGCGCCACGCACCTGAACGCCGAGAAATTCAAGCTGGCCGCGAAGATCGACGCGACCAACATCCCGTTCAAGGGATCGGGCGAAGCCGTGACCGAGGTGCTCTCGGGCCGCGTCGACTACTACTTCTCGCCCATCGCGCCGGTCATCGGCCAGATCAAGGAAGGGCAACTGCTGGCGCTCGCCGTGGGTTCGCCCAAGCGCGCCGCCGCCCTGCCCGACGTGCCCACCACCACCGAGGCCGGCGTACCTGGCTCCGAATTCAACTTCTGGATCGGAATGATGGCGCCGGCCAAGACCCCGCGCGACATCGTCGAGCGGCTGCACGCCGAAGTGACCAAGGCCTTGGCCACGCCCGAGGTGAAAGAGCGCTTCGCCAAGCTCGGCGCCGACCCATGGACGCTCAAGCCCGCGCAGTTCGACGCCTACATCAAGGAAGAGATCGCCAGCAACGCGGAACTCGTGAAGGCCGCCGGCCTGTCGGTCCAACAGTAA
PROTEIN sequence
Length: 331
MKFFASTARTTVLASLTCIAALLPGMAFAQNGYPAKPIRVIVPFAAGSTTDIIARAIADKMGASMGQVLVIDNRGGASGTIGQQAVATAAPDGYTLMIHSSSHTVSPSTFAKLPFDTVHDFAGVTPISSLPNALVIAPSKNIKTLPQLLAAARAKPGSMNFASAGQGSATHLNAEKFKLAAKIDATNIPFKGSGEAVTEVLSGRVDYYFSPIAPVIGQIKEGQLLALAVGSPKRAAALPDVPTTTEAGVPGSEFNFWIGMMAPAKTPRDIVERLHAEVTKALATPEVKERFAKLGADPWTLKPAQFDAYIKEEIASNAELVKAAGLSVQQ*