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SCNpilot_cont_300_bf_scaffold_83_curated_34

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 31489..32262

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI0003822021 similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 257.0
  • Bit_score: 494
  • Evalue 5.50e-137
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EJL76230.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 257.0
  • Bit_score: 487
  • Evalue 1.60e-134
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 257.0
  • Bit_score: 484
  • Evalue 1.80e-134

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGTTCCGCAAGCTCCTGCTCTCCCCCGCCCTGCGCCCTTTTCTGCTGATCCTGATGCTGCTGGTGCTGTGGGACCTGGCGATCCGCCTCTTCAAGATTCCCGCCTACCTGATTCCACCGCCCTGGGAGGTGGTGAAACAGCTCGTCGCCGAATGGCCGCACCTGCTCGCCGAGAGCTGGAAGACCACGCTCGCCACGCTGGGCGGCTTCGGCCTGACCATCCTCATCGGCATTCCGATTGCGATGGTCATCGCCTACTCCCGCGTGGTGGAGTCCTACGTGTACCCGCTGCTGGTGTTCTCGCAGAGCATTCCCAAGGTGGCGATCGCGCCGCTGTTCGTGGTGTGGTTCGGCTTCGGCATCTTCCCCAAGGTGATCAGCGCCTTCCTGCTGGGCTTCTTCCCGGTGGTGGTGTCCACGGTGATGGGCTTCAAGTCGGTCGAACCCGACATGCTGGACCTCTCGCGCTCAATGGGTGCGAGCCGCCTGCAGACCTTCTTCAAGATCAGCCTGCCGCAGGCGCTGCCGCAAATATTCAGCGGCCTGAAGGTGTCGGTCACGCTGGCCGTGGTGGGTGCGGTGGTCGGCGAGTTCGTCGGCTCCAACTCGGGCATCGGCTACGTGCTGCAGGTGGCCAACGGCAACTTCGACCTGCCGCTGATGTTCGCCGCGCTGGTGGTGCTGTCGAGCATCGGCGTGATCCTTTTCGTCGCGGTCGACCTGGTCGAGCGCGTGATGATTCCGTGGCACGCCTCGCAGCGCCACGCGCACTGA
PROTEIN sequence
Length: 258
MFRKLLLSPALRPFLLILMLLVLWDLAIRLFKIPAYLIPPPWEVVKQLVAEWPHLLAESWKTTLATLGGFGLTILIGIPIAMVIAYSRVVESYVYPLLVFSQSIPKVAIAPLFVVWFGFGIFPKVISAFLLGFFPVVVSTVMGFKSVEPDMLDLSRSMGASRLQTFFKISLPQALPQIFSGLKVSVTLAVVGAVVGEFVGSNSGIGYVLQVANGNFDLPLMFAALVVLSSIGVILFVAVDLVERVMIPWHASQRHAH*