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SCNpilot_cont_300_bf_scaffold_83_curated_80

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(82948..84510)

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4Z5_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 520.0
  • Bit_score: 993
  • Evalue 5.90e-287
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 520.0
  • Bit_score: 993
  • Evalue 1.80e-287
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADU38176.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 520.0
  • Bit_score: 993
  • Evalue 8.20e-287

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
ATGGCCACCGCTGCTCCTGCTTACATTGCGCATCCGCCGCTCGAGGGCGCAGCCCGCGTCTGGGGCACGGTCGCGCTGTCTGCGGCAACTTTCATGAACGTGCTCGATTCGTCGATCGCGAACGTGTCGTTGCCCGCCATCTCGGGCGACCTGGGCGTGAGCACCACGCAAGGCACCTGGGTCATTACCAGCTTCGCGGTGGCCAACGCCATCGCGGTGCCGCTCACGGGCTTCATGACGCAGCGCTTCGGACAGGTTCGCCTGTTCATGGCCAGCGTGATCCTGTTCATGGTCGCCTCGCTGCTGTGCGGCCTGGCGCCCAACATGACGACGCTGATCCTGTTTCGCGCGCTGCAGGGCTTCGTCGCGGGTCCGATGATTCCGCTGTCGCAGACGCTGCTGCTGTCGAGCTATCCGCGCGCCAAGGCGGGCCTGGCCATGGCGATGTGGTCGATGACCACGCTGGTCGCGCCGGTGATGGGGCCGCTGCTCGGCGGCTGGATCACCGACAACATCTCCTGGCCGTGGATCTTCTACATCAACATTCCCGTCGGCATCGTCGCGGCTTCCATCACGTGGGCGCTGTATCACAAGCGCGAGAGCGTCACGCACAAGGTGCCGATCGACGCCATCGGACTGGCGCTGCTGGTGCTGTTTGTCGGCTCGATGCAGCTGATGCTCGACAAGGGCAAGGAGCTCGACTGGTTCCATTCGCCGCAGATCGTCACGATGGCGGTGGTGGCCGTGGTCGGCTTCGCGTTCTTCCTGGTCTGGGAGCTGACCGACAAGCACCCGGTGGTCGACCTGTCGCTCTTCAAGCGCCGCAACTTCTGGTCGGGTGCCGTGGCCACGGCCGTGGCCTACGGCCTGTTCTTCGGCAACGTGGTGCTGCTGCCCCTGTGGCTGCAGCAGTGGATGGGCTACACCGCCACGCAGGCGGGGATGATCATGGCGCCCGTGGGGATGCTGGCGATCTTCTTCTCGCCGATCGTCGGGCTCACGGTGTCCAAGATCGATCCGCGCCGCTATGCGACCTTCTCGTTCCTGGTGTTCGCGCTGGTGCTGTGGATGCGGTCGAACTTCAACACGCAGGCCGATTTCGTCACCATCATCATCCCGACGGTGATCCAGGGCATCGCGATGGCGTTCTTCTTCATTCCGCTCGTGACCATCACGCTGTCGGGCCTCACGCCCGACCGCATTCCGGCCGCGTCGGGGTTGTCGAACTTCCTGCGGATCACCGCCGGCGCCATGGGCACGTCGCTCACCACCACCTTGTGGGACAACCGCGCGACGCTGCACCACACGCAGCTCTCGGAGACGATCAACCAGGGCAACAACGCGGCCACGAGCGCGATGGCCGGGCTCGGCAGCAGCGGCTTCAGCACTGAGCAGGTGCTGGGGCAGATGAACCGCATCGTCGACCAGCAGGCCTACATGCTGGCCACGAACGACATCTTCTATGCGTCGGCCATCCTGTTCCTGCTGCTGATTCCGCTGGTGTGGCTGGCGCGCCCGCAAAAGGGCGGCGCCGGTGGCGACGCCGCAGCCGGCGCGCACTGA
PROTEIN sequence
Length: 521
MATAAPAYIAHPPLEGAARVWGTVALSAATFMNVLDSSIANVSLPAISGDLGVSTTQGTWVITSFAVANAIAVPLTGFMTQRFGQVRLFMASVILFMVASLLCGLAPNMTTLILFRALQGFVAGPMIPLSQTLLLSSYPRAKAGLAMAMWSMTTLVAPVMGPLLGGWITDNISWPWIFYINIPVGIVAASITWALYHKRESVTHKVPIDAIGLALLVLFVGSMQLMLDKGKELDWFHSPQIVTMAVVAVVGFAFFLVWELTDKHPVVDLSLFKRRNFWSGAVATAVAYGLFFGNVVLLPLWLQQWMGYTATQAGMIMAPVGMLAIFFSPIVGLTVSKIDPRRYATFSFLVFALVLWMRSNFNTQADFVTIIIPTVIQGIAMAFFFIPLVTITLSGLTPDRIPAASGLSNFLRITAGAMGTSLTTTLWDNRATLHHTQLSETINQGNNAATSAMAGLGSSGFSTEQVLGQMNRIVDQQAYMLATNDIFYASAILFLLLIPLVWLARPQKGGAGGDAAAGAH*