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SCNpilot_cont_300_bf_scaffold_83_curated_81

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(84561..85883)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance efflux pump n=1 Tax=Variovorax sp. CF313 RepID=J2SVW3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 441.0
  • Bit_score: 792
  • Evalue 2.20e-226
Multidrug resistance efflux pump {ECO:0000313|EMBL:EJL69747.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 441.0
  • Bit_score: 792
  • Evalue 3.10e-226
hemolysin D; K03543 multidrug resistance protein A similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 449.0
  • Bit_score: 779
  • Evalue 6.00e-223

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGAGCGATAACAACACTCCGACGCCCGCTGCAGCCGCAGCTCCTGCTGCCCCCGAGGCGCCCGCCGGCAACGGCAAGCGCCGCCGCGCGCTCACCGCGCTGGCCGCGGTGGTCATCGTCGCCGGCGGCGGCTGGGGTCTCTACGAATGGCTGGTCGCCAGCCACTACGAGGACACCGACAATGCCTACGTCTCGGGCAACGTGATCCAGATCACCCCGCAGATCGGCGGCACCGTCATGTCCATCAACGCCGACGACACCGACTTCGTGAAGGCCGGCCAGCCGCTGGTGCAGCTCGACCCGGCCGACGCCAAGGTGGCGCTGGAGCAGGCCGAGGCCGCGCTCGCGCAGGCCGTGCGCCAGGTGCGCACGCTGTACGCCAACAACGGCTCGCTGGCCGCGCAAGTCACGCTGCGCCAGTCGGACATCGTCAAGGCCCAGAGCGACATCGCCAAGGCGCAGGACGACCTGCAGCGCCGCCGCGCGCTGTCGGGCAACGGCGCCGTGTCGAAGGAAGAACTCAACCACGCCGAGACGGCACTCGACACCGCCAAGAGCCAGCTCGCGGCGGCGCAGGCCGGCGTGATCGCCGCCAAGGAAGCGCTGGTCAGCAACCAGTCGCTGACCGAAGGCACCAGCGTGGCGCAGCACCCCAGCGTGCTGGCCGCCGCCGCCAAGGTGCGCGAGGCCTACCTGGCCACGCAGCGCGTCGCCATGCCCGCGCCGGTCGACGGCTACGTTGCCAAGCGCACCGTGCAGCTCGGCCAGCGCGTTGCCGCCGGAACGCCGATGATGTCGATCGTGCCGCTCAACCAGCTGTGGGTCGACGCCAACTTCAAGGAAGTGCAGCTGCGCAACATCCGCATCGACCAGCCCGTGAAGCTCACCGCCGACGTGTACGGCAAGAAGGTCGAGTACACCGGCAAGGTCGCCGGCCTGGGCGTGGGCACCGGCAGTGCGTTCGCGCTGCTGCCCGCGCAGAACGCCACCGGCAACTGGATCAAGGTGGTGCAGCGCGTGCCCGTGCGCATCGCGCTCGACCCCGAACAGCTGAAGGCCAACCCGCTGCGCATCGGCCTGTCGATGGACGCCGAAGTCGACATCTCGTCCAAGAGCGGCAAGATGCTGGCAGACGCGCCGCGCCCCGCCGCGCTGGTGCAGACGCAGGTCTACAGCCAGCTCGACCGCGGCGCCGACGCCGAAGTGGACCGCATCGTCGCGGCCAACCTCGGCCGCAGCGCCCCCGCCACGGCAACGGCACCGGCCAAGGGCTCCGCCGCGCCGGCCGGTGCATCGGTGGCCGTGCAAGGCCAGCCGGGCTGA
PROTEIN sequence
Length: 441
MSDNNTPTPAAAAAPAAPEAPAGNGKRRRALTALAAVVIVAGGGWGLYEWLVASHYEDTDNAYVSGNVIQITPQIGGTVMSINADDTDFVKAGQPLVQLDPADAKVALEQAEAALAQAVRQVRTLYANNGSLAAQVTLRQSDIVKAQSDIAKAQDDLQRRRALSGNGAVSKEELNHAETALDTAKSQLAAAQAGVIAAKEALVSNQSLTEGTSVAQHPSVLAAAAKVREAYLATQRVAMPAPVDGYVAKRTVQLGQRVAAGTPMMSIVPLNQLWVDANFKEVQLRNIRIDQPVKLTADVYGKKVEYTGKVAGLGVGTGSAFALLPAQNATGNWIKVVQRVPVRIALDPEQLKANPLRIGLSMDAEVDISSKSGKMLADAPRPAALVQTQVYSQLDRGADAEVDRIVAANLGRSAPATATAPAKGSAAPAGASVAVQGQPG*