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SCNpilot_cont_300_bf_scaffold_83_curated_199

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(217562..219094)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036E2A0E similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 510.0
  • Bit_score: 971
  • Evalue 3.10e-280
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 510.0
  • Bit_score: 614
  • Evalue 3.00e-173
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:BAK77027.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 510.0
  • Bit_score: 614
  • Evalue 1.30e-172

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Taxonomy

Pseudogulbenkiania sp. NH8B → Pseudogulbenkiania → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1533
ATGAGCGTCGCGCCCGGAACCAAGGTGCCGCACCGCGGGATGATCACCATCTCGATCATGCTGGCGACCATCATGCAGGCGCTGGACACCACCATCGCCAACGTGGCGCTGCCGCACATGCAGGGCAGCCTGCAGGCCTCGCAGGACCAGATCACCTGGGTGCTGACCTCGTACATCGTGGCCTCGGCCATCGCGCTGCCGCTGACGGGCTGGCTCTGCGGGCATTGGGGGCGCAGGCGCGTGTTCATCATCTCGGTGATCGGCTTCACCGTGGCCTCGGCGCTTTGCGGGCTCGCGACCTCGCTGGTCGGCATCGTGGCGGCGCGGCTGTTGCAGGGCATTTTCGGCGCGGCGCTGGTGCCGCTGTCGCAGGCGGTGCTGCTGGACATCAACCCGCGCGAGAAGGTCGGCCAGGCAATGGCGATCTGGGGCGCGGGCATCATGGTCGGGCCCATCCTGGGGCCGCTGCTGGGCGGCTGGCTCACCGAGAACTTCGACTGGCGCTGGGTGTTCTTCATCAACCTGCCGGTGGGCATCTTCGCCTTCTGGGGCATCGCGCGCTACCTGCCGGAGAGCCGGCCGCAGGGCGAGAAGCTCGACATCTTCGGCTTCGTGACGCTGAGCCTGGCCATCGGCATGCTGCAGCTCTTTCTGGACCGGGGCGAGCAGCTCGACTGGTTCGACTCGTGGGAAATCAAGCTCGAAGCCGCCGCCGCGCTGGTGGCCTTCGGCTTCTTCGTGGTCCATACCTGGACGGTGCAGGGCGTGTCCTTCTTCGACCGCGACCTGCTGAAAGACCGCAACTTCGTCACCGGGCTGTTGTTCGCCTTCATCGTCGGCATGATCTTGTTCGCCACGATGGCACTGCTGCCCAACTTCCTGCAGGGGCTGATGGGTTATCCGGTGGTCTACACGGGGCAGGTGACGGCGCCGCGGGGCGTCGGAACCATGATCGCGATGATCATCGTCGGGCGGCTGGTGCAGAAGGTCGACGTGCGTGCGATCATGGCCGTGGGCTTCGGCCTCACGGCGTTCTCGCTCTACCAGATGACGCGGCTCACGCTGCAGATGGACAGCACGCTGATCATCGTCTCGGGCTTCATCCAGGGGCTGGGCATCGGCTTCACCTTCGTGCCGCTGTCGACCGCCACCTTCGCCACGCTGGCTCCGCGCCTGCGCAACCAGGGCACGCCGATCTTCAGCCTGCTGCGCAACATCGGCAGCAGCGTGGGCATCTCGATCGTGCAGGCGCTGCTGACCGAAGGCTCGAGCAAGGCGCACGCGCAGATCGCCGCGACGGTGGCGCCGGGCAACCAGGCGCTGTCGACACTGCCGCAGATGATGTCGCCGGACACGATGACCGGGCTGGCGCTGCTCAATGCAGAGGTGACGCGGCAGGGGGCGCTGGTGGGTTACCTGGACGACTTCGCGATCATGATGATCATCACGGTGCTGGCGATTCCGCTGCTGTTGCTGATTCGCAGCCCCAAGCGGAGTGCGGCTGCGTCGGGGCCGGCGGAAGTGCCGCACTGA
PROTEIN sequence
Length: 511
MSVAPGTKVPHRGMITISIMLATIMQALDTTIANVALPHMQGSLQASQDQITWVLTSYIVASAIALPLTGWLCGHWGRRRVFIISVIGFTVASALCGLATSLVGIVAARLLQGIFGAALVPLSQAVLLDINPREKVGQAMAIWGAGIMVGPILGPLLGGWLTENFDWRWVFFINLPVGIFAFWGIARYLPESRPQGEKLDIFGFVTLSLAIGMLQLFLDRGEQLDWFDSWEIKLEAAAALVAFGFFVVHTWTVQGVSFFDRDLLKDRNFVTGLLFAFIVGMILFATMALLPNFLQGLMGYPVVYTGQVTAPRGVGTMIAMIIVGRLVQKVDVRAIMAVGFGLTAFSLYQMTRLTLQMDSTLIIVSGFIQGLGIGFTFVPLSTATFATLAPRLRNQGTPIFSLLRNIGSSVGISIVQALLTEGSSKAHAQIAATVAPGNQALSTLPQMMSPDTMTGLALLNAEVTRQGALVGYLDDFAIMMIITVLAIPLLLLIRSPKRSAAASGPAEVPH*