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SCNpilot_cont_300_bf_scaffold_83_curated_200

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(219091..219570)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003755EC9 similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 160.0
  • Bit_score: 270
  • Evalue 8.10e-70
Variovorax paradoxus strain MEDvA23 contig_50, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28097.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 159.0
  • Bit_score: 268
  • Evalue 7.30e-69
regulatory protein MarR similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 144.0
  • Bit_score: 113
  • Evalue 5.20e-23

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAAAAGGGACTTCACCCAGCGCTTCGGTTTTCTCGTCAAGAGCGTGGGCAAGCTCTACAGCGAAGAGTTCGACCGCCTGGCGCGCGAGCGCATCGGCCTCACCAGCGCCCAGTGCCGCCTGCTCGGCGCCTTGGCCATGCACGACGAAGACGAGCCGCTGTCGCAGGCGGAACTGGCGCTGCGCCTCGACCTCACGCCGATGGCGGTGGCCGGCCTGTGCGACCGCATGGCCGCGGCCGGCTGGATCCGCCGCGAGCCCAGCCCGACCGACCGCCGCGTCAACAAGATCCACCTGGAGCCCAGCGCCGAAAAGGCGCTCGACGGCGCGCTGAGCATCAGCGACGGGCTCAATGCCCGCGTGATGTCGGTGCTGTCGCAGGCCGAGCGCGCGCAGCTCTTGAGCCTGCTGACCCGGGTGCACGGCAGCCTGCTCGACATCACCTCGCCCCAGGACGCGAAGGAGGCCAGGAAGCCATGA
PROTEIN sequence
Length: 160
MKRDFTQRFGFLVKSVGKLYSEEFDRLARERIGLTSAQCRLLGALAMHDEDEPLSQAELALRLDLTPMAVAGLCDRMAAAGWIRREPSPTDRRVNKIHLEPSAEKALDGALSISDGLNARVMSVLSQAERAQLLSLLTRVHGSLLDITSPQDAKEARKP*