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SCNpilot_cont_300_bf_scaffold_399_curated_2

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 133..558

Top 3 Functional Annotations

Value Algorithm Source
heat shock protein Hsp20 n=1 Tax=Variovorax paradoxus RepID=UPI000371A8E8 similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 141.0
  • Bit_score: 269
  • Evalue 2.70e-69
Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:EJL80413.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 141.0
  • Bit_score: 242
  • Evalue 2.90e-61
hsp20; putative heat shock protein Hsp20 similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 141.0
  • Bit_score: 233
  • Evalue 5.20e-59

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGAACACCGCACTGTCCCGCCTGGACCGCATCGAAAACCTCTTTCCCGACATGCTGCGCCGCTGGGCGCGGCCCCTGCAGCTGATCGACGAGGCCGAGCTGCCGGCCGACATCCGGCTCGACATCAACGAGAACGACAAGGAATACCTCGTCACCGCCGAGATCCCCGGCGCGAGGAAGGAGGACGTGCGCGTCTCCATCGACGGCAGCTACGTCTCCATCTCGGCCGAGATCAGGAAGGACGAGGAGAAGAAGCAGGGCCGCTCCATCGTCCGCGAGACCTATCGCGGCAACATGTCGCGCGGCTTCTCGCTGGCCAGCGAAGTCGACGACAAGACCGCCGTGGCGAAGCTCGAGGACGGCGTGCTGCACCTGACGCTGCCCAAGCGCGAAGGCTCGGCCCGTACCACGCTGAAGATCCAGTAG
PROTEIN sequence
Length: 142
MNTALSRLDRIENLFPDMLRRWARPLQLIDEAELPADIRLDINENDKEYLVTAEIPGARKEDVRVSIDGSYVSISAEIRKDEEKKQGRSIVRETYRGNMSRGFSLASEVDDKTAVAKLEDGVLHLTLPKREGSARTTLKIQ*