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SCNpilot_cont_300_bf_scaffold_399_curated_14

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 9990..10211

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Variovorax paradoxus RepID=UPI00037BE655 similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 73.0
  • Bit_score: 138
  • Evalue 2.20e-30
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:EJL76432.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 71.0
  • Bit_score: 121
  • Evalue 6.70e-25
transport-associated similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 69.0
  • Bit_score: 104
  • Evalue 1.90e-20

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGAACCCCGACATTCAACTCAGGCACGACGTCTTCGCGCAACTCAACTGGGACCCCGCCGTCAACGGCTGCGACATCGACGTGTGCGTCAAGGACGGCGTCGTGACACTGCGCGGCCAGGTGGCCGACGAGGAGCGGCGCGCCGCGGTGGAGCGCGCCGCACGCCGCACCGAGGGGCTGACGACGCTGCTGAACAGGCTCGTCGTCCGGCCTCCGGAATGA
PROTEIN sequence
Length: 74
MNPDIQLRHDVFAQLNWDPAVNGCDIDVCVKDGVVTLRGQVADEERRAAVERAARRTEGLTTLLNRLVVRPPE*