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SCNpilot_cont_300_bf_scaffold_399_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 11779..12864

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance efflux pump n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IR42_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 361.0
  • Bit_score: 500
  • Evalue 1.80e-138
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIF33194.1}; Flags: Precursor;; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 361.0
  • Bit_score: 500
  • Evalue 2.60e-138
export system membrane fusion protein; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 361.0
  • Bit_score: 446
  • Evalue 1.00e-122

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Taxonomy

Burkholderia sp. Ch1-1 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGAGCAAGAAGCTGATCTTCGCGCTGGCGTTGACCGGCCTGCTGGCCGGACTGGTCGCTGCCTACGTCTTCGGCATCGAGCGCAAGGCACAACAGCCCGCGTACGCACCGGTCAGCAATCCCTACAGGACGGCGATCTACGCCAACGGCATCGTCGAGAGCGACCAGAGTTCGGGTGCCAACGTCAACATCTACCCCGAGGTCCCGGCCCTGATTGCGCAGGTGCTCGTGCACGACGGGCAGGCCGTCAAGGCCGGCACGCCGCTGGTGATGCTCGACGATTCGGTGCAGAAGGCCACGACCGAGCAATTGCGGCTGCAGGCCGAGGCGGCGCTCGCGCTGCTGAACGAACTCCAGGCCCAGCCGCGCAAGGAGGTACTGGCCATCGCCAAGGCACAGGTCGACCTCGCGCAGTCCAGTCTCAAGGTGGCGGACGATCAATTCGCAAAGCGGCGCGCCAGCTACAACATCGATCCGCACTCGATCAGCAAGGACGCCCTCGACACGGCCGACGATGCGGTGCGGCAAGCCGCGGCGGCGCTGGAAGTGGCCCGCCGGCAGTACGTGCTCGCGCATGCGGGGGCCTGGAGCTACGACATAGAGAACCAACGCAGGCAGTACGAGGCGCTTCAGCAGTCCTACAGGGCTTCCCAGGCATTGCTGCAGAAGTACGTCGTGACGGCCCGCATGGACGGCGTGGTGCTGGCCGTCAACGCCTCGGTCGGCAGCTACGTGTCCTCGCTCGGCGTGCTGGACAGCTACACGCAGACGCAGGCGCCCCTGGTCGTCATGAGCACGCCGCAGGACCATCTGGCTGTGCGTTGCTACGTCGACGAGATCCTGGCCTCTCGGCTGCCGCCGCCGGACCGGATCCAGGCCCAGATGTCGCTGCGTGGCACCGATGTGAAGGTTCCCCTGGAGTTCGTGCGGGTGCAGCCCTACGTGTCGCCGAAGATCGAACTCGCGAACCAGCGGCAGGAGAAAGTGGACCTGCGCGTGCTGCCCGTGATCTTCCGCTTCCGGATGCAAAGCCCCGCCATGGTGTATCCCGGCCAGCTGGTCGATGTGTTCATTGGACAGAAATGA
PROTEIN sequence
Length: 362
MSKKLIFALALTGLLAGLVAAYVFGIERKAQQPAYAPVSNPYRTAIYANGIVESDQSSGANVNIYPEVPALIAQVLVHDGQAVKAGTPLVMLDDSVQKATTEQLRLQAEAALALLNELQAQPRKEVLAIAKAQVDLAQSSLKVADDQFAKRRASYNIDPHSISKDALDTADDAVRQAAAALEVARRQYVLAHAGAWSYDIENQRRQYEALQQSYRASQALLQKYVVTARMDGVVLAVNASVGSYVSSLGVLDSYTQTQAPLVVMSTPQDHLAVRCYVDEILASRLPPPDRIQAQMSLRGTDVKVPLEFVRVQPYVSPKIELANQRQEKVDLRVLPVIFRFRMQSPAMVYPGQLVDVFIGQK*