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SCNpilot_cont_300_bf_scaffold_399_curated_34

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(29530..30354)

Top 3 Functional Annotations

Value Algorithm Source
universal stress protein UspA n=1 Tax=Variovorax paradoxus RepID=UPI00037A93B1 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 274.0
  • Bit_score: 489
  • Evalue 2.50e-135
Universal stress protein UspA-like protein {ECO:0000313|EMBL:EJL76429.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 274.0
  • Bit_score: 481
  • Evalue 9.50e-133
putative universal stress protein similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 274.0
  • Bit_score: 437
  • Evalue 2.70e-120

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGCCGACCCCGAAATCCATCCTGCTTCACCTCGACGGCACGGCCCGCGCGGCGGAGCGCATCGAGCTGGCCCGCCAGCTCGCCGAGACCTTCGATGCCGAGGTGACGGCCCAGCCGTGCACCCTGTCGGCGCTGATGCGCTACCCCTACGCCATCGAGGCCGCCGCGGAAGCGGTCGCGATCATGCAGGAGATCGACAAGGACGCGCGCGACAGGATGCACGCCACCTTCATGCAGCACAGCGCGGATTCGCCGCGCCTGCATTGGGTCGAGGCCGAAAGCGACGGGCCCTGGGGGTTCGGCCGGCGTGCCCTATATGCCGACCTGCTGATCCTCGGCCAGCGTGACCGGAACGACCCGATGGACGCAGAACTGCCCGGCGACTTCCTGCCAAGCGTGCTGGTGCAGAGCGGCCGGCCGGCGCTGGTGCTGCCTTACGCGGGGCCGATCGGTCCCATCGGCCGCAACGTGCTGGTGGCCTGGAAGGAAACGCGCGAATCCGCGCGCGCCGTGAGTTCCGCCCTGCCGTGGCTGTGCAAGGCGGACCGCGTGGACGTCGTCGCGTACGGCGAGGGTGCGGCTGCATCGCTGCAGAGCCTGCAGGCCTACCTGCGGGCGCAGGGTGTCGGCAACATCCGCCTGCATCCCGGCGGGGACAAGGACGACGACGTCGGCAACAAGCTGCTGTCGCTCGCCTCCGACCTGAGTTCCGACCTGCTGGTGATGGGCTGCTACGGCCACAGCAGGGCGCGCGAGTGGGTGATGGGCGGCGCCACGCTGTCCATGCTCCAGTGGATGACCTTGCCGGTGCTGATGTCGCATTGA
PROTEIN sequence
Length: 275
MPTPKSILLHLDGTARAAERIELARQLAETFDAEVTAQPCTLSALMRYPYAIEAAAEAVAIMQEIDKDARDRMHATFMQHSADSPRLHWVEAESDGPWGFGRRALYADLLILGQRDRNDPMDAELPGDFLPSVLVQSGRPALVLPYAGPIGPIGRNVLVAWKETRESARAVSSALPWLCKADRVDVVAYGEGAAASLQSLQAYLRAQGVGNIRLHPGGDKDDDVGNKLLSLASDLSSDLLVMGCYGHSRAREWVMGGATLSMLQWMTLPVLMSH*