ggKbase home page

SCNpilot_cont_300_bf_scaffold_116_curated_17

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(33335..34576)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V635_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 416.0
  • Bit_score: 747
  • Evalue 9.90e-213
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 416.0
  • Bit_score: 747
  • Evalue 3.10e-213
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADU38270.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 416.0
  • Bit_score: 747
  • Evalue 1.40e-212

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGTCATCCCCGCCCGCCGCGTCGACCTCGTCCCCCGAATCTCCGTTCTCCCTGTGGCGTATCGCCGTGCCGGCCTTTGCGCCTTCGCTGTTGTTCGGATTGGGCGAGGGCGCCATCTTGCCGATCGTGCCGCTGACGGCGCGGGACCTTGGCGCTTCCGTGCCCATGGCCGCGCTGGTGATCGCGATGATCGGCATCGGCTCGCTGATCAACAACATTCCGGCCTCGATGATCACCATGCGCTGGGGCGAGCGCTGGGCCATCGTGGCGGCAGGCGTGTGGAGCGGCCTTGGCATGCTCCTGTGCGTGCTCACCTCGCATCTGGGTCTGTTCGCCACCGGGTGCTTCATGGTGGGCATGTCGCAGGCGGTCTACAACCTGGCGCGCCAGAGCTACATGACCGAGGCGGTGCCTGTGGCGTACCGTGCGCGGGCGCTGTCGACGCTGGGCGGCGTCATGCGCATCGGCATGTTCGCCGGCCCCTTCCTCGCGGCTGCCGCGGTGCATGCGTTCGGCCTGTCGGCAGCCTATGTGGTCGGGATCGTGGCGGTGTTGGGGGCGGCTGCAATAGGGGCTCGCATCCCCGATCTCGAGACGCCGCCAGTCCCGGCCGGGCAGACGGCGCCGGCCTCGACGTCCGTTGTCTCCACACTGCGGGACCACCGCCGCGTGTTCCTCACGCTCGGCGTTGGCGTGGTGCTGGTCAGCGCGGTGCGCGCATCGCGCCAGGCCGTGATCCCGCTGTGGGCCGATCACCTGATGCTGGCACCTTCGGTGGCGTCGCTGATCTACGGCCTGGCCGGCGGCATCGACATGCTGGTGTTCTATCCGGCCGGCAAGGTGATGGACCGGAAGGGCAGGCGCTGGGTGGCGGTGCCGTCGATGCTGATCATGGGGCTTGCCATGCTGTTGATACCCCTGACGTCCGGTGCTCTCACGCTGCTGCTGGCGTCGCTGGCGATCGGCTTCGGAAACGGTATCGGCTCCGGGATGATCATGACCTTGGGTGCCGACCAGTCGCCGCGCCACGGACGCGCGCACTTCCTCGGCATATGGCGGCTGATGTCCGACATCGGCTCTTCGTGCGGTCCGGCTCTGCTGTCCCTGCTGGCGGGCGGCCTGTCGCTCGCTGCGGGGATTGCCGTGACGGGATTGATCGCCTTTGCCGCTGCGGGAACGCTGGCGTACTGGATTCCGCGGCGCGGGAGTGCCGGTGGCGCGGGGTCCACAGCGCCGAGGTAG
PROTEIN sequence
Length: 414
MSSPPAASTSSPESPFSLWRIAVPAFAPSLLFGLGEGAILPIVPLTARDLGASVPMAALVIAMIGIGSLINNIPASMITMRWGERWAIVAAGVWSGLGMLLCVLTSHLGLFATGCFMVGMSQAVYNLARQSYMTEAVPVAYRARALSTLGGVMRIGMFAGPFLAAAAVHAFGLSAAYVVGIVAVLGAAAIGARIPDLETPPVPAGQTAPASTSVVSTLRDHRRVFLTLGVGVVLVSAVRASRQAVIPLWADHLMLAPSVASLIYGLAGGIDMLVFYPAGKVMDRKGRRWVAVPSMLIMGLAMLLIPLTSGALTLLLASLAIGFGNGIGSGMIMTLGADQSPRHGRAHFLGIWRLMSDIGSSCGPALLSLLAGGLSLAAGIAVTGLIAFAAAGTLAYWIPRRGSAGGAGSTAPR*