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SCNpilot_cont_300_bf_scaffold_116_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(35603..37297)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003770E74 similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 559.0
  • Bit_score: 872
  • Evalue 2.80e-250
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EJL93458.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 551.0
  • Bit_score: 427
  • Evalue 3.30e-116
methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 580.0
  • Bit_score: 421
  • Evalue 3.10e-115

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1695
ATGACGTCTTTCAAGAATCTCAGAATCTCCACCAAGCTGGCGTTTGCCTTTCTCAGCATCGTGTTGCTGATGATCGCGATGGCCGTCTTCTCGATCCATCGCCTCAATCGCCTGAATGACCAGACCAACTTCATGGTGACGGCGCGCATGGCGAGTGTTCGCGATGCGGGCCAGATGAGCGAGGCCGCCAACCGGGTGCGCCTGCTCGAATTCCGCCTGGCCACGGCGCCAGCCAGCGAAGTCGCGGATGTGCTGCGGAACATCGCGGAGGCTTTCAAGACATACGACGTCGTCGACAAGGCCTATCCTGCATCGATCGGCGACCCGACCGAGCAATCCATCTACGACCGGGTGAAGGCGCGACAACCCGCATGGGCTGCGGCGCATGCCAAGATCGAACAGCTGGTTCAGGAGGACCGCCGTGCCGACGCCGTGAACCTGTTGAATGGCGAAGCACGCGACGCCTTCCGGGCATTGAGGGAGCCGCTGGCCCAGCTGGTGAAACACAACGAAGACCGCGCCCGGATCGAGGCCGAGGAAAGCAACGTGACGTTCACCACCGGAGCGGTGCTGATCGCTTCGGGTGCTGGCCTTGCCTTCTTGTTGGCCGTGCTGCTGTCCTGGAGCGTTTCGCGGGGAATCGTGGTTCCGCTGAAGGACGCTGTGCGCCTGGCGGAAGCCGTTGCGGCCGGAGACCTCACGCAGCGCCTGAACTCCGACAGCAAGGACGAGGTGGGTGACCTGCTGCGAGCGCTCGCGGCGATGCGCGACAACCTCGTGCAGACGTTGACCGGCATGCGGGAGAGCAGTGATTCCGTCGCCACGGCGAGCGCGCAGATTGCCTCGGGCAATTCCGATCTTTCCAGCCGCACGGAACAGACCGCCGGCAGCCTGCAGCGGACCGCGGCATCGATGGAGGAACTCACCTCCACCGTCAAGACGGCGTCCGAAGCCGCCTCGCAGGCGAATCAACTGGCCTTGACCGCTTCGAAGATCGCGGTGCACGGCGGCGAGGTCATCTCGGAAGTGGTCGAGACCATGCGCGACATCCACGGCAGTTCGCAGAAGATTGCCGCCATCATCGGCACGATCGACGGCATCGCATTCCAGACCAACATCCTGGCACTGAACGCCGCCGTGGAGGCGGCCAGGGCGGGCGAGCAGGGCCGTGGCTTTGCCGTGGTGGCGAGCGAGGTTCGCAATCTGGCGCAACGCAGTGCGGTGGCGGCGAAGGAGATCAAGACGCTCATCGAAGCATCGGTCGACAAGGTAGGGTCGGGCTCCCAGCTGGTCAACGATGCAGGCGCCACGATGGGCAAGATCGTCGAGAGCGTTCAACGCGTCTCCAACACCGTCAGCGAGATCAGCGCGGGAGCGATCGAACAGGCGGCCGGCATCGACCAGATCAATTCGGTGGTGGCGCAGCTGGAACAGATGACGCAGGAGAATTCCGCGCTCGTCGAGGAATCGGCCGCCGCCGCGGAGAGCCTCAAGGGTCAGGCCGACCGGCTCTCAACGCTTGTCGAGTTCTTCCAGCTGGGGACGACATCCTTGCGCGCAGTGCGCGCCGACGAATCGAGCGCACCGATGTCAGTACGGGCGCCGCGTATTGCTCCCAGCGTGTCGGCCATGCCTGCGATCGCCGCCCAGAAGACGGGCCGGCGCGAACTCGACAGGGACTGGGCTACTTTCTGA
PROTEIN sequence
Length: 565
MTSFKNLRISTKLAFAFLSIVLLMIAMAVFSIHRLNRLNDQTNFMVTARMASVRDAGQMSEAANRVRLLEFRLATAPASEVADVLRNIAEAFKTYDVVDKAYPASIGDPTEQSIYDRVKARQPAWAAAHAKIEQLVQEDRRADAVNLLNGEARDAFRALREPLAQLVKHNEDRARIEAEESNVTFTTGAVLIASGAGLAFLLAVLLSWSVSRGIVVPLKDAVRLAEAVAAGDLTQRLNSDSKDEVGDLLRALAAMRDNLVQTLTGMRESSDSVATASAQIASGNSDLSSRTEQTAGSLQRTAASMEELTSTVKTASEAASQANQLALTASKIAVHGGEVISEVVETMRDIHGSSQKIAAIIGTIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAVAAKEIKTLIEASVDKVGSGSQLVNDAGATMGKIVESVQRVSNTVSEISAGAIEQAAGIDQINSVVAQLEQMTQENSALVEESAAAAESLKGQADRLSTLVEFFQLGTTSLRAVRADESSAPMSVRAPRIAPSVSAMPAIAAQKTGRRELDRDWATF*