ggKbase home page

SCNpilot_cont_300_bf_scaffold_189_curated_8

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(6247..7275)

Top 3 Functional Annotations

Value Algorithm Source
Putative 4-oxalomesaconate hydratase n=1 Tax=Variovorax paradoxus B4 RepID=T1XJG0_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 342.0
  • Bit_score: 656
  • Evalue 1.10e-185
Variovorax paradoxus strain MEDvA23 contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ30894.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 342.0
  • Bit_score: 658
  • Evalue 7.00e-186
putative 4-oxalomesaconate hydratase similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 342.0
  • Bit_score: 656
  • Evalue 3.50e-186

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGATCATCGACTGTCACGGCCACTACACGACCGCGCCCAAGGCCCTGGAGGCATGGCGCAACCGGCAGATCGCCGGTATCACGGCCCCATCGGAAAGGCCCAAGGTCTCGGAGCTGAAGATCAGCGACGACGAACTGCGCGAATCCATCGAGACCAACCAGCTGCGCCTGATGAAGGAGCGCGGCAGCGACCTGACCATCTTCAGCCCGCGCGCGAGCTTCATGGCGCATCACATCGGCGACTTCGAGGTCTCCTCGACCTGGGCCGCCATCTGCAACGAGCTGTGCTTCCGCGTGAGCGAGCTTTTTCCCGATCACTTCATCGGCGCGGCGATGCTGCCGCAATCGCCCGGCGTCGACCCTGCCAGCTGCATTCCGGAGCTGGAGCGCTGCGTGAACGAATACGGCTTCGTGGGCATCAACCTCAACCCGGACCCCTCGGGCGGCCACTGGACCAGCCCGCCGCTGTCGGACCGCCACTGGTATCCGCTCTACGAAAAGATGGTGGAGCTGGACATTCCCGCGATGGTGCACGTGAGCACCAGTTGCAACGCCTGCTTCCACACCACCGGCGCGCACTACCTGAATGCCGACACCACGGCCTTCATGCAGTGCCTCACATCGGACCTGTTCAAGGACTTCCCGGCGCTGCGCTTCGTCATTCCACACGGCGGCGGCGCGGTGCCTTACCACTGGGGGCGTTTTCGCGGCCTCGCGCAGGAGCTGAAGAAGCCGCTGCTGAAGGACCACCTGCTCAACAACATCTTCTTCGACACCTGCGTCTACCACCAGCCGGGCATCGACCTGCTCACGCGCGTGATCCCGGTCGACAACGTGCTGTTCGCGAGCGAAATGATCGGCGCGGTGCGCGGCATCGACCCCGAGACCGGCTTCAACTACGACGACACGCGCCGCTACATCGACGCCACGCCCATGCTCGACGACAAGGCCCGCCGCCAGATCTACGAAGGCAACGCGCGCCGCGTGTATCCGCGCCTGGACCGCGCGCTCTCTCAAAAAGGACTCTGA
PROTEIN sequence
Length: 343
MIIDCHGHYTTAPKALEAWRNRQIAGITAPSERPKVSELKISDDELRESIETNQLRLMKERGSDLTIFSPRASFMAHHIGDFEVSSTWAAICNELCFRVSELFPDHFIGAAMLPQSPGVDPASCIPELERCVNEYGFVGINLNPDPSGGHWTSPPLSDRHWYPLYEKMVELDIPAMVHVSTSCNACFHTTGAHYLNADTTAFMQCLTSDLFKDFPALRFVIPHGGGAVPYHWGRFRGLAQELKKPLLKDHLLNNIFFDTCVYHQPGIDLLTRVIPVDNVLFASEMIGAVRGIDPETGFNYDDTRRYIDATPMLDDKARRQIYEGNARRVYPRLDRALSQKGL*