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SCNpilot_cont_300_bf_scaffold_189_curated_14

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 12467..14365

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Variovorax sp. CF313 RepID=J3CJ90_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 635.0
  • Bit_score: 1086
  • Evalue 0.0
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EJL72566.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 635.0
  • Bit_score: 1086
  • Evalue 0.0
type II secretion system protein e similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 632.0
  • Bit_score: 990
  • Evalue 3.20e-286

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1899
ATGTCATCCACCGAAGTCACCTTGCCCGAGCAACTGCTGCGCGCACTCGAACTCCAGAGTCACGCGCCCGTCGCCCGAATCGGCGAAGCACTGGTTTCGCTGGGCATGGTCAGCGACGAGCAACTGCGCGAGGGCCTGGTCCGGCAGCGGCTCGAACCCCAGGTGCCGCTGGGCGAGATGCTGGTGCGCATGGGCGTGGTGAGCCACGGCCAGTTGCAGACCGCGCTGGTGCGCAAGATGGGTTATCCGCTGGTGAACCTGAATCTCTTTCCCGCGGCCGCCGATGCGCTGCGCAAGGTGGGCCACGGCGTGGCCCGGCGCCTGCAGGTCATGCCGCTGATGCTGCACCAGGGGCGGCTCGTCGTCGCGCTCGACGACCCGAGCAGCCGGCATTCGGCGCTCGAGGAGATCGAATTCATTGCGCAGATGAAGGTCACTCCGGTGGTGGGGCAATGCCTGGACCTCGACAGCGTGCTGGGCGCGGCCTACGAAAAAATCGGCGAGCCTTCCATCGGCATCTTCTCGACCAATGTGGACCCGGGGCGCCCGCTGGAGTTCGACCTGGCCGGCACCAGCGAACTGCTGCAGACCCTCGAGAAAGAAGGCCCTGCCTCCGCGCCCCCCGCCGAGGCACCCATCGAGCAGTCGGACAACTCGCTGGTGCGCATGATCAACAGCATGATCCTGGAGGCGCACCGCGAGGGCGCCTCGGACATCCACATCGAAAGCTACCCCGGCCAGGAAAAGACCCGCATCCGGTTTCGCCGCGACGGGCTGCTCTACACCTACCTGGAGCTACCGCCGAGCTATCGCAACGCGATCGTCGCGCGCGTGAAGATCATGTGCGACCTCGACATCAGCGAGAAGCGCAACCCGCAGGACGGCAAGATCAACTTCGCCAAGTACTCGCCGCAGCATCGCATCGAACTGCGCGTGGCGACCATCCCGACCAACAACGGCCTGGAAGACGTGGTGATGCGCATCCTGGCGTCCTCCAAGCCGATTCCGATGAGCGAGCTGGGCCTGTCGCCGAACAACCTCGCGCAGCTCACGAAGGCCGTCGAGCGGCCCTACGGCATGGTGTTGTGCGTCGGCCCCACCGGCTCGGGCAAGACCACCACGCTGCACTCGGCGCTGATGCAGATCAACACGCCAGAGCGAAAGATATGGACCGCGGAAGACCCGGTCGAAATCACCCAGCCCGGCCTGCGGCAGGTGCAGATCAATCCCCGCATCGACTGGACCTTCGCCAAGGCGCTGCGCGCCTTCGTGCGCGCGGACCCGGACGTCATCATGGTCGGCGAAATCCGCGACGAGGAAACCGCCAAGACCGCGATCGAGGCGTCGCTGACCGGCCACCTGGTGCTGTCGACCCTGCACACCAACAGCGCGCCCGAGACCGTGACGCGCCTGCTCGACATGGGCATGGACCCGTTCAACTTCGCGGACTCGCTGCTGGCGGTGCTGGCGCAGCGGCTGGTGCGTCGCCTGTGCAGCCGCTGCACCAGCAGCAGCCCGGCAAGCTCCGAGAGGATCGAGGAACTGCTGGACGACTACCTGCATGCCTTCGGCACCCGCGAGGACGACGCGGGCCGGCAGCGCAATGCGGTGCGCGACGTCTGGCTGCGCCGCTACGGGCGCGAGGGGCGGCTGCACGCCTACACCAGCGTCGGCTGCAAGCACTGCGGCGGCACGGGCTTCAAGGGGCGCGTGGGCATCCACGAACTCATGGTGATGTCCAAGACGCTGCGCCGCCTGGTGCAGACCGGCGCGCGCGCCGAAGAACTCCAGCTGGCGGCGCTGCAGGAGGGCATGCGCACGCTGCGCCAGGACGGCATCGAGAAAGTGCTGGCCGGACACACGACCGTGGAGGAAGTGCGCGCGACCAGCAATGTGTGA
PROTEIN sequence
Length: 633
MSSTEVTLPEQLLRALELQSHAPVARIGEALVSLGMVSDEQLREGLVRQRLEPQVPLGEMLVRMGVVSHGQLQTALVRKMGYPLVNLNLFPAAADALRKVGHGVARRLQVMPLMLHQGRLVVALDDPSSRHSALEEIEFIAQMKVTPVVGQCLDLDSVLGAAYEKIGEPSIGIFSTNVDPGRPLEFDLAGTSELLQTLEKEGPASAPPAEAPIEQSDNSLVRMINSMILEAHREGASDIHIESYPGQEKTRIRFRRDGLLYTYLELPPSYRNAIVARVKIMCDLDISEKRNPQDGKINFAKYSPQHRIELRVATIPTNNGLEDVVMRILASSKPIPMSELGLSPNNLAQLTKAVERPYGMVLCVGPTGSGKTTTLHSALMQINTPERKIWTAEDPVEITQPGLRQVQINPRIDWTFAKALRAFVRADPDVIMVGEIRDEETAKTAIEASLTGHLVLSTLHTNSAPETVTRLLDMGMDPFNFADSLLAVLAQRLVRRLCSRCTSSSPASSERIEELLDDYLHAFGTREDDAGRQRNAVRDVWLRRYGREGRLHAYTSVGCKHCGGTGFKGRVGIHELMVMSKTLRRLVQTGARAEELQLAALQEGMRTLRQDGIEKVLAGHTTVEEVRATSNV*