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SCNpilot_cont_300_bf_scaffold_189_curated_121

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(165356..166918)

Top 3 Functional Annotations

Value Algorithm Source
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EYR77875.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EYR77875.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 515.0
  • Bit_score: 620
  • Evalue 2.50e-174
Monosaccharide-transporting ATPase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWJ5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 515.0
  • Bit_score: 620
  • Evalue 1.80e-174
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 517.0
  • Bit_score: 613
  • Evalue 8.80e-173

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
ATGAACAGCAGTTCCTCGACCGGCGGGAGCAGCCCTGCGCGCCCTGCGCTGGTGCTCGACGGCGTCACCGTGCAATACGACACCGTGAAGGCGTTGTCGGACGTTTCCATCGCTTTCGAGGAAGGCCGGATCCACGCGGTGGTCGGCCAGAACGGCGCGGGCAAGACCACCTTCGCCCGCGTCTGCTCCGGCCTGGTGAAACCCACGCAGGGGCGCGTGCGCATCGGCGAGCACGAGATCCGCACCGGCCACGTGAACGCCGCGCGCGCGGCCGGCGTCGAACTGGTGCACCAGAGCTTCGCGCTGCCCGCGTCGTTCACCGTCGCGCAGGCGATGGAGTTCGGCGCCACGCGGCACGGCGGCCTGTTCACCGCGCGCCAGCTCGAGAAGCGCTGGCAGGCGCACCTCGACGGCCTGGGCCTTTCGGTGAGCCCGCGCGAGGTGATCCGCAACCTGCCCATCGAGACGCAGCAGGGCATCGAGATCGCCCGCGCGCTGGTCACCGACGCGCGCGTGCTGATCCTGGACGAGCCCACTGCCGTGCTCGCGCCGGCCGGCGTGGAGACGCTGTTCGAGCGCATCCGCATCCTGAAGAAGCGCGGCGTGACCGTCGTGCTCATCCTGCACAAGATCCGCGAAATGATGGCCATCGCCGACACCGTGAGCGTGCTGCGCCGCGGCGAGCACGTCACCGGCCCGGTGCCGTGCGCATCGATAGGCGCGGCCGAACTGAGCGAATGGATCATGGGCGATGCCAAGGCGCCGCAAGCCGCGGCGCAGTCCGCCGTGCCGACGCCGCGCACCCAAGACAGGCTCACCGCCCCCGCCGTTCTGCGCCTGCGCAATCTCTCGACCCGGCCCGATGCCGAAGGCACGGCGCTGAACGACGTGAGCCTCGACGTGCGCGCGGGCGAGATCATCGGCATCGCGGGCGTCGAAGGCAACGGCCAGCGCACGCTGGTGCGCGCCATCGCCGCGCTGGCCGGCACCGCATCGGGCACGCTCGAATTCGGCGGCAAGGACATGACCCACAGCGACCTCGCCACGCGGCGTGCGGCGGGCCTGCGCATCATCCCCTTCGAGCGCAATGTGGAGGGCCTCTCGCTGAGCAGCAGCCTGTGGGAGAACTGGTCGATGGGCCGGCTGCTGCAGGGTGGGCTGCTGTCGTTCGCGCGGCCCAAGAAGCTGCAGGCCGAATGCGACACCGCGCTTGCGCAGTGGGACGTGCGCTACGCCAACTGCGCACAGCCAGCGGGCTCGCTCTCGGGCGGCAATGCACAGAAAGTGATCTTCGCGCGCGAGGTGGACCAAAGCGCCCGCCTCGTCATCGCGGCGCAACCCACGCGCGGCCTGGACATCGGCGCCACCGCCTATGTGTGGAAAGCGCTGCGGCAGGCGCGCGACCGGGGCGCGGCCATCATCCTCATCTCGTCCGATCTGGACGAGCTCTTCGACATCAGCGACCGCGTGCTGGTCATGCTGCGCGGGCAGGTGGTCGGCGAATATGGCGCGCCCTACGACCTGCGCCAGGTCGGCCAGGCGATGGTGGGAGCGCACGCATGA
PROTEIN sequence
Length: 521
MNSSSSTGGSSPARPALVLDGVTVQYDTVKALSDVSIAFEEGRIHAVVGQNGAGKTTFARVCSGLVKPTQGRVRIGEHEIRTGHVNAARAAGVELVHQSFALPASFTVAQAMEFGATRHGGLFTARQLEKRWQAHLDGLGLSVSPREVIRNLPIETQQGIEIARALVTDARVLILDEPTAVLAPAGVETLFERIRILKKRGVTVVLILHKIREMMAIADTVSVLRRGEHVTGPVPCASIGAAELSEWIMGDAKAPQAAAQSAVPTPRTQDRLTAPAVLRLRNLSTRPDAEGTALNDVSLDVRAGEIIGIAGVEGNGQRTLVRAIAALAGTASGTLEFGGKDMTHSDLATRRAAGLRIIPFERNVEGLSLSSSLWENWSMGRLLQGGLLSFARPKKLQAECDTALAQWDVRYANCAQPAGSLSGGNAQKVIFAREVDQSARLVIAAQPTRGLDIGATAYVWKALRQARDRGAAIILISSDLDELFDISDRVLVMLRGQVVGEYGAPYDLRQVGQAMVGAHA*