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SCNpilot_cont_300_bf_scaffold_189_curated

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Displaying items 121-150 of 240 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_189_curated_121
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(165356..166918)
DNA (1563bp) protein (521aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EYR77875.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EYR77875.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Monosaccharide-transporting ATPase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWJ5_9RHIZ
ABC transporter
SCNpilot_cont_300_bf_scaffold_189_curated_122
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166935..167987)
DNA (1053bp) protein (351aa)
ABC transporter substrate-binding protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3IZI4_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMG52081.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
ABC transporter substrate-binding protein
SCNpilot_cont_300_bf_scaffold_189_curated_123
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168048..168368)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZ08_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54037.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NIPSNAP family containing protein
SCNpilot_cont_300_bf_scaffold_189_curated_124
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168396..170021)
DNA (1626bp) protein (542aa)
CHDH; Choline dehydrogenase, mitochondrial (EC:1.1.99.1)
Glucose-methanol-choline oxidoreductase n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KB67_9RHIZ
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EMG52079.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
SCNpilot_cont_300_bf_scaffold_189_curated_125
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170030..170881)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JIH8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMG52078.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_189_curated_126
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171035..171688
DNA (654bp) protein (218aa)
HTH-type transcriptional regulator RutR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJ50_9RHIZ
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EHS49114.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
tetracycline transcriptional regulator YcdC domain-containing protein
SCNpilot_cont_300_bf_scaffold_189_curated_127
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172185..174314
DNA (2130bp) protein (710aa)
TonB-dependent siderophore receptor family protein 13 n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLF7_9BURK
TonB-dependent siderophore receptor family protein 13 {ECO:0000313|EMBL:EGJ09175.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_189_curated_128
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174335..175228
DNA (894bp) protein (298aa)
Periplasmic-binding protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLF8_9BURK
Periplasmic-binding protein {ECO:0000313|EMBL:EGJ09176.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ABC transporter substrate binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_189_curated_129
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175225..176217
DNA (993bp) protein (331aa)
Transport system permease n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLF9_9BURK
ABC transporter permease; K02015 iron complex transport system permease protein
Transport system permease {ECO:0000313|EMBL:EGJ09177.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
SCNpilot_cont_300_bf_scaffold_189_curated_130
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176214..176948
DNA (735bp) protein (245aa)
ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter ATP-binding protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXQ9_RUBGI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL97796.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCNpilot_cont_300_bf_scaffold_189_curated_131
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176945..177985
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XCV0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37654.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Luciferase-like, subgroup
SCNpilot_cont_300_bf_scaffold_189_curated_132
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178160..178540
DNA (381bp) protein (127aa)
helicase SNF2 n=1 Tax=Variovorax paradoxus RepID=UPI00036F30F5
snf2 superfamily protein
SNF2 superfamily protein {ECO:0000313|EMBL:ADU34629.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_189_curated_133
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178645..180306)
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000381EE85
Putative membrane-anchored protein {ECO:0000313|EMBL:EZP41836.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_189_curated_134
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180303..181295)
DNA (993bp) protein (331aa)
Putative membrane protein (DUF2157) n=1 Tax=Acidovorax sp. CF316 RepID=J0K8Y4_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_cont_300_bf_scaffold_189_curated_135
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181408..181797)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2SQ97_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL67697.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_189_curated_136
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182026..183102
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K352_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL67698.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative Bug-like extra cytoplasmic solute receptor, TTT family
SCNpilot_cont_300_bf_scaffold_189_curated_137
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183148..183891
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CAM2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL67699.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_189_curated_138
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183939..184862
DNA (924bp) protein (308aa)
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000377C0B8
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU53680.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_189_curated_139
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184850..185914)
DNA (1065bp) protein (355aa)
Putative porin n=1 Tax=Variovorax paradoxus B4 RepID=T1XM57_VARPD
putative porin
Putative porin {ECO:0000313|EMBL:AGU53678.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_189_curated_140
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186059..186934)
DNA (876bp) protein (292aa)
Amidohydrolase 2 n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WME2_VEREI
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ABM58799.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_300_bf_scaffold_189_curated_141
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186966..187943)
DNA (978bp) protein (326aa)
TctC n=1 Tax=Variovorax paradoxus RepID=UPI0003622C9E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22679.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_189_curated_142
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188085..189002)
DNA (918bp) protein (306aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2JIH6_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL67700.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_189_curated_143
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

189072..190496
DNA (1425bp) protein (475aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWD0_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18685.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_189_curated_144
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190493..190861
DNA (369bp) protein (123aa)
beta-lactamase n=1 Tax=Variovorax paradoxus RepID=UPI000369FC36
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU49268.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_189_curated_145
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190911..191876
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K360_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL67703.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_189_curated_146
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

192081..193988
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1Z8_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU38001.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_189_curated_147
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193998..195965)
DNA (1968bp) protein (656aa)
Signal transduction histidine kinase n=1 Tax=Variovorax sp. CF313 RepID=J2SQA3_9BURK
Signal transduction histidine kinase {ECO:0000313|EMBL:EJL67707.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_189_curated_148
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196285..196587
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EA45_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE49114.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_189_curated_149
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196600..196923)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KTN1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE54468.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_189_curated_150
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196916..198601)
DNA (1686bp) protein (562aa)
Putative iron-regulated membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EQS8_9BURK
Putative iron-regulated membrane protein {ECO:0000313|EMBL:EJE54469.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
pepsy domain-containing protein
Displaying items 121-150 of 240 in total

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