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SCNpilot_cont_300_bf_scaffold_189_curated_147

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(193998..195965)

Top 3 Functional Annotations

Value Algorithm Source
Signal transduction histidine kinase n=1 Tax=Variovorax sp. CF313 RepID=J2SQA3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 616.0
  • Bit_score: 1013
  • Evalue 1.20e-292
Signal transduction histidine kinase {ECO:0000313|EMBL:EJL67707.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 616.0
  • Bit_score: 1013
  • Evalue 1.60e-292
putative signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 661.0
  • Bit_score: 1007
  • Evalue 2.00e-291

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1968
ATGAGGCTAGGCAGCAAAGGCTGTTGGCGAATTGGCTGGTCGATCGCAAAGCTCTGGCTGGCTCTCCTGCTGGCCATCCTGCCCTGTGCGCACGCCGACGAATCGCCGCGGAACGAAGACACCGCCGTCCACATCACGCGGGCGGAACTGCTTTCCGTGACCGGTACCGGCTATTCCCTCCCCCCTCAGCACATCGAAGCCGACACGCTGCTGAGCGACGGCTGGAAGCCGGTCGACCTTCCGTACACCGCCGCGCGCGAGCTCGTGCCCACGGCCTCGAGCGGCATGCGGGCCATCACCGACTGGTACCGCATCGACCTTTCCGGTCAGCCCCGCACGACGCAACAACGCGTTCTGTACCTCCCGCGCTGGAAGACCCTGGGACACATCTCGGTGTACGGCGACGGCGTGCTGCTCTACCAGTCGCACGGCAGCCCGATCCACAACGGCTACAACCACCCGCTGCTGCTGCCGCTGAACGCGACCGCGAACACGCTGTCGCCGACGTCCGTGCTGATCCGCGTCGACCGCCTGCGCAACAGCGGAAGCGGTTTTTCGACGGTGTGGGTGGGCGACGAGCACGCCCTGGCCTGGCGCTACCAGTCGCGCCAGCTGCTGCAGGTGCAGTTGCCGTTCATGGGCAGCGCCGCGTTCCTGGCGGTGGGCGCCTTCGCGTTCGCGGTGTGGCTGGGCAAGCGGCGCGAGTCGCTCTATTTGCTGTTCTCCGCCATCTCGGGCGTGGCGTTCCTGCGGATGCTGCACTACTACGTGGGCGGCAGCTACATCCCGATTTCGGACGAATGGTTCGAATGGATGACCGTGTCCAGCCTGCTCTGGCTGATCGTGCTCATCCACCTGTTCCTGCAGCGCCTGCACCAGCAGCCCTCGGCCTGGCTGACCCGCGTGGCGCTGGGCCTGACGCTGGCCTGCAATCTCGCGACGCTGCCGCACGTGTCGACCTCGATCGTCAGCCTGTACCTGTTCACGCCACTGCTCAACCTGGCGGTACTGCCCGTCGCGGTACTGATCTTCGCAGTGAACCTGCGCAAGGCCCTGCGGGCGCAACTGCCCGAAGGCCGGCTGGTGGCGGGCTGGACCGTGTTCGCGGTCGTGTTCACTTCCTATGACGGGCTGCTGCAGAACAACCTGGTCAGCCCGGAGAGCGTGTACACCTCGCCCTACGCCATCATCAGCCTGTTCTTCGTCTTCTCGTTCATCATGTTCCAGCGCTACACCGGCGCGTTCGCCGAGGTCGGGCGGCTGAACACCGAGCTGGTCCTGCGGCTGCGCGCGCGCGAAGCCGAGCTGGAGCAAAGCTACCAGCGCCTGCGCGTCATCGAGAACCAGCAGATGCTCAATGCCGAGCGGCGGCGCCTGATGCAGGACATGCACGACGGCCTGGGCTCGTCGCTGATCAGCGCCATCCGCTCGGTGGAACGCGGCACCATGAACGAGGCCGAGATTTCCAGCGTGCTCAAGAGCTGCATGGAAGACCTGAAGCTGGTGATCGACTCCATGGAAAGCGTGGACGCCGACCTGCTGCTGCTGCTGGCGACCCTGCGTTTTCGCCTGGCGCCGCGCATCGAGAGCGCCGGCGTCGCGCTGCGCTGGGAAGTGCAGCCGGTGCCGGTGCTGGCCTGGCTGGACCCGAACAGCGCGCTGCACATCCTGCGCATCGTGCAGGAATGCGTGGCCAACGTGCTGCGCCACACCCGGGCTTCCTCCATCTGCTTCAGCACCATGACGGTGCACGACGGCGTCTGCGTGGTGATCGAGGACAACGGCGAGGGCTTCGCCGTGGACGAGGCCCTGCGCCGCAACGGCCGCGGGCTGCGCAACCAGCAGCAGCGCGCCCAGGCCATCGGCGGCGCGGTGAGCTGGGAGTCCGGCAGCGCCGGAACCCGCTTCACGCTCTGGCTGCCGCTTCACCGCGAAGCCGACGCCGCCAGGACTCTCGATCCCGCCTGA
PROTEIN sequence
Length: 656
MRLGSKGCWRIGWSIAKLWLALLLAILPCAHADESPRNEDTAVHITRAELLSVTGTGYSLPPQHIEADTLLSDGWKPVDLPYTAARELVPTASSGMRAITDWYRIDLSGQPRTTQQRVLYLPRWKTLGHISVYGDGVLLYQSHGSPIHNGYNHPLLLPLNATANTLSPTSVLIRVDRLRNSGSGFSTVWVGDEHALAWRYQSRQLLQVQLPFMGSAAFLAVGAFAFAVWLGKRRESLYLLFSAISGVAFLRMLHYYVGGSYIPISDEWFEWMTVSSLLWLIVLIHLFLQRLHQQPSAWLTRVALGLTLACNLATLPHVSTSIVSLYLFTPLLNLAVLPVAVLIFAVNLRKALRAQLPEGRLVAGWTVFAVVFTSYDGLLQNNLVSPESVYTSPYAIISLFFVFSFIMFQRYTGAFAEVGRLNTELVLRLRAREAELEQSYQRLRVIENQQMLNAERRRLMQDMHDGLGSSLISAIRSVERGTMNEAEISSVLKSCMEDLKLVIDSMESVDADLLLLLATLRFRLAPRIESAGVALRWEVQPVPVLAWLDPNSALHILRIVQECVANVLRHTRASSICFSTMTVHDGVCVVIEDNGEGFAVDEALRRNGRGLRNQQQRAQAIGGAVSWESGSAGTRFTLWLPLHREADAARTLDPA*