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SCNpilot_cont_300_bf_scaffold_189_curated

Search features with annotation key words

Displaying items 151-180 of 240 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_189_curated_151
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198636..198935)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KLK0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE54470.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_189_curated_152
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199014..200051)
DNA (1038bp) protein (346aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Variovorax sp. CF313 RepID=J2KFJ2_9BURK
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJL71913.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_189_curated_153
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200235..201026
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CHU7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL71914.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative oxidoreductase, SDR family
SCNpilot_cont_300_bf_scaffold_189_curated_154
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

201061..202302
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JVL3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL71915.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
dehydrogenase/oxygenase subunit (flavoprotein)
SCNpilot_cont_300_bf_scaffold_189_curated_155
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

202310..204043
DNA (1734bp) protein (578aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Variovorax sp. CF313 RepID=J3CI62_9BURK
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:EJL71916.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative FMN reductase
SCNpilot_cont_300_bf_scaffold_189_curated_156
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204058..205290
DNA (1233bp) protein (411aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Dienelactone hydrolase-like enzyme n=1 Tax=Variovorax sp. CF313 RepID=J2T1N9_9BURK
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EJL71917.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_189_curated_157
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

205422..206420
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F5F05
Variovorax paradoxus strain MEDvA23 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36267.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ompa/motb domain-containing protein
SCNpilot_cont_300_bf_scaffold_189_curated_158
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206434..207069)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1V9_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU37962.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_189_curated_159
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207119..207613)
DNA (495bp) protein (165aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2K366_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL67708.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
SCNpilot_cont_300_bf_scaffold_189_curated_160
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207679..209457
DNA (1779bp) protein (593aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
acetolactate synthase, large subunit, biosynthetic type; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Variovorax sp. CF313 RepID=J3CAM7_9BURK
SCNpilot_cont_300_bf_scaffold_189_curated_161
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209471..209902)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YNC1_9ALTE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_cont_300_bf_scaffold_189_curated_162
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209911..210687)
DNA (777bp) protein (259aa)
4-carboxymuconolactone decarboxylase (EC:4.1.1.44); K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
4-carboxymuconolactone decarboxylase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003704604
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein {ECO:0000313|EMBL:EHR06078.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
SCNpilot_cont_300_bf_scaffold_189_curated_163
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210699..211166)
DNA (468bp) protein (156aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Pseudomonas putida (strain W619) RepID=B1JA01_PSEPW
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACA73578.1}; Flags: Precursor;; TaxID=390235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain W619).;"
SCNpilot_cont_300_bf_scaffold_189_curated_164
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211276..212169)
DNA (894bp) protein (298aa)
Transcriptional regulator n=1 Tax=Burkholderia sp. BT03 RepID=J3B7H1_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EIM99445.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_189_curated_165
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212269..213279
DNA (1011bp) protein (337aa)
aldo/keto reductase (EC:1.1.1.91)
Aldo/keto reductase 2 family oxidoreductase related to aryl-alcohol dehydrogenases {ECO:0000313|EMBL:CBJ35766.1}; EC=1.1.1.91 {ECO:0000313|EMBL:CBJ35766.1};; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
Aldo/keto reductase 2 family oxidoreductase related to aryl-alcohol dehydrogenases n=1 Tax=Ralstonia solanacearum RepID=D8N2A1_RALSL
SCNpilot_cont_300_bf_scaffold_189_curated_166
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213298..214353
DNA (1056bp) protein (352aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:CDS53865.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CDS53865.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
NADP-dependent alcohol dehydrogenase; K13979 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-]
Candidate NADP-dependent alcohol dehydrogenase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4J7_RAMTT
SCNpilot_cont_300_bf_scaffold_189_curated_167
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214370..216103)
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036569FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU49287.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_189_curated_168
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216143..216790)
DNA (648bp) protein (216aa)
FMN-binding domain protein n=40 Tax=Bordetella RepID=V8U592_BORPT
FMN-binding domain protein {ECO:0000313|EMBL:KCV64383.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
regulatory protein
SCNpilot_cont_300_bf_scaffold_189_curated_169
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216805..217797)
DNA (993bp) protein (331aa)
Putative acetyl esterase n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WQA6_BORBR
Putative acetyl esterase {ECO:0000313|EMBL:KCV64441.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
acetyl esterase
SCNpilot_cont_300_bf_scaffold_189_curated_170
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217794..219458)
DNA (1665bp) protein (555aa)
ABC transporter ATPase (EC:3.6.3.-); K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
peptide ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003682D7C
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC51174.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_300_bf_scaffold_189_curated_171
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219455..220270)
DNA (816bp) protein (272aa)
ABC transporter permease (EC:3.6.3.24); K02034 peptide/nickel transport system permease protein
peptide ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000375A967
Peptide ABC transporter permease {ECO:0000313|EMBL:KJC40183.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
SCNpilot_cont_300_bf_scaffold_189_curated_172
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220272..221216)
DNA (945bp) protein (315aa)
peptide ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI000370F374
Peptide ABC transporter {ECO:0000313|EMBL:KJC40263.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_189_curated_173
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221235..222854)
DNA (1620bp) protein (540aa)
ABC transporter substrate-binding protein (EC:3.6.3.-); K02035 peptide/nickel transport system substrate-binding protein
peptide ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037D109A
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC40264.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
SCNpilot_cont_300_bf_scaffold_189_curated_174
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222909..224009)
DNA (1101bp) protein (367aa)
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; K10852 isopenicillin-N N-acyltransferase [EC:2.3.1.164]
peptidase C45 n=1 Tax=Variovorax paradoxus RepID=UPI00036A477F
Peptidase C45 {ECO:0000313|EMBL:KJC59041.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_300_bf_scaffold_189_curated_175
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224035..225390)
DNA (1356bp) protein (452aa)
beta alanine--pyruvate transaminase; K00822 beta-alanine--pyruvate transaminase [EC:2.6.1.18]
beta alanine--pyruvate aminotransferase n=1 Tax=Variovorax paradoxus RepID=UPI00037DAC8A
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:KFC72222.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_300_bf_scaffold_189_curated_176
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225520..226488
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036352D2
GntR family transcriptional regulator {ECO:0000313|EMBL:EXF93568.1}; TaxID=1042209 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens HK44.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_189_curated_177
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226509..227738
DNA (1230bp) protein (410aa)
6-aminohexanoate-dimer hydrolase (EC:3.5.1.46); K01453 [EC:3.5.1.46]
6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:ABR90175.1}; EC=3.5.1.46 {ECO:0000313|EMBL:ABR90175.1};; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
6-aminohexanoate-dimer hydrolase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395CD9C
SCNpilot_cont_300_bf_scaffold_189_curated_178
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227786..229075
DNA (1290bp) protein (430aa)
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:AIU28831.1}; EC=2.6.1.19 {ECO:0000313|EMBL:AIU28831.1};; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19]
4-aminobutyrate aminotransferase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI000237505E
SCNpilot_cont_300_bf_scaffold_189_curated_179
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229098..229493)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126N1_POLSJ
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_cont_300_bf_scaffold_189_curated_180
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229671..230054
DNA (384bp) protein (128aa)
Response regulator receiver protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1U9_VARPE
Variovorax paradoxus strain MEDvA23 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36277.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
response regulator receiver protein
Displaying items 151-180 of 240 in total

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