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SCNpilot_cont_300_bf_scaffold_189_curated_180

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 229671..230054

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1U9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 125.0
  • Bit_score: 190
  • Evalue 1.10e-45
Variovorax paradoxus strain MEDvA23 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36277.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 118.0
  • Bit_score: 195
  • Evalue 6.30e-47
response regulator receiver protein similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 125.0
  • Bit_score: 190
  • Evalue 3.50e-46

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGACAACAGAACCGCCGCTGACAACACAACAACAAAAGCTCCGGGTGCTCCTGGTCGAGGACGATGCCGACACGCTCGCCACCACCTTGAAGCTGCTCGAGGCCCTGGGGCATTGGGCCACCGGCGTGAAGAGCGCCGAGGCCGCGATCGCCCGCTTCTTCGATGGCGCGTTCGACGTGGTGATGGTGGACATCGGCCTGCCCGCGCTGTCGGGCCGCGATCTGGCCGAGCGGCTGCTGAATGATCACCGCGTGCCCGTGGTCTTCGTGACGGGGCAGGCCGAGCCGGCCACGGCGATGAAGGGCACCGTGTGGCTGCGCAAGCCCTACACCATCGAGCAACTGACGCAGACGCTGGAGCGTTCGCTGGCCGCGGTGAGATAG
PROTEIN sequence
Length: 128
MTTEPPLTTQQQKLRVLLVEDDADTLATTLKLLEALGHWATGVKSAEAAIARFFDGAFDVVMVDIGLPALSGRDLAERLLNDHRVPVVFVTGQAEPATAMKGTVWLRKPYTIEQLTQTLERSLAAVR*