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SCNpilot_cont_300_bf_scaffold_189_curated_173

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(221235..222854)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein (EC:3.6.3.-); K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 511.0
  • Bit_score: 591
  • Evalue 2.90e-166
peptide ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037D109A similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 537.0
  • Bit_score: 965
  • Evalue 1.80e-278
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC40264.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 501.0
  • Bit_score: 629
  • Evalue 3.20e-177

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Taxonomy

Bradyrhizobium sp. LTSP849 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
ATGAACGTACCCGTGCCCCCCTCTCGCCCACCCTCCGCACCGCGCGCCGGTGCATTGCGCGCCGCCGCCCTGGCATTGGGCTTGACCGCCGCAGCCTCGGTCTGCGCCCAGCCCGCGGCTGGCGCCGGGCAGACACTGCGCATACAGATCAACTCCGACATCCGCTCCACCGACCCCGGCGGCAACCGCGACGACAACACCGACAACGTGCTGCTGCACGTGGGCGAGGGCCTGGTCGCGCTGCGCGAAGACACCTCCGTGGGCCCCATGCTGGCGAGCAAGGTCGACACCTCGGCCGACGGCCTGACCTACACCTTCACCCTGCGCGACGGCGTGAAGTTCCAGAACGGCGCCACGCTCACCGCCGACGACGTCGTGTGGAACTGGCAGCGCTACCTGAAGCCCGCCACCAACTGGCGCTGCCTGCCGGAGTTCGACGGCAAGGGCATGACCAAGGTGCTCTCGGTCGAGGCACCCAACCCGAAGACGGTGGTGTTCAAGCTCGAGCGCGCGAGCGCCCTGTTCCTCACGATGATGGCGCGGCCCGACTGCGGCAGCTCGGCCATCGTGCACCGCAGCTCGGTCGGCCCCGACGGCCAGTGGAAGGAGCCCGTGGGCACCGGCCCCTACAAGCTCAAGGAATGGAAGCGCGGCCAGTACGTGGAACTCACCCGCTTCGACGGCTACAGCTCGCGCGCCGAGCCGCGCGACGGCCTCACCGGCGGCAAGAAGGCCGAGGTCGAGAACCTGCGCTTCGTCGTCATTCCCGACTCGGCCGCCGCCAAGGCCGCGCTCTACAGCGGCGGCATCGACGCCTTCATCAGCCCCAGCCCGTCGGACGTGATCGAGATGCGCAAGCGCAGCGACGTGCTGGTCGACACCACGCCGGTCATGACCATGGTCGCGCTGCTGCTGCAGACCAACGACCCGGTGCTCAAGGACGTGCGCATCCGCCGCGCGCTGGCGCTGGCGCTCGACACGCCCGAGATCGCGCGCTCAGTGACCGAAGGCCTCTCCGCCGTCAACAACTCGGTCGTGCCGTCGTCCAGCCCCTACTACGACGCGGTGCAGGGCAGCGGCTTCAAGCGTGACCTCACGGCCGCGAAGAAGCTGCTGGCCGAGGCGGGCTACCGCGGCCAGTCGATCCGCATGATCGCCAACAAGCGCTACGAGGCGCTCTACTCCGCCGCCGTGCTGGTGCAGGCCATGGCCTCGGAGGCCGGCATCAACGTCGAGCTCGAAGTGCTCGACTGGGCCACCCAGCTCGACCGCTACACCAAGGGCCAGTACCAGAGCATGGCCTTCGTCTACTCCGCGCGCATCGACCCCGCGCTCAACTACGAGATGGTGTCCGGCGACAAGGCCGCGCAGCCACGCAAAGTGTGGGACAGCCCCTATGCCCAGACCCGCCTCACCGAAGCCATGGTGTCGCGCGACAAGGCGCGCCGCCAGGCGCTGTTCGACGAGATGCACAAGCAGATGCTGCAGGACGTGCCGATGATCGTGCTCTTCAACGCCAGCGACGCCACCGCCATGCGCAAGAACGTGGTCGGCTTCAAGGGCTGGGCGCCTGCCAAGCCGAGGTTCTGGAACGTGCGGCTCGCCGCTGCCGCCGGCTGA
PROTEIN sequence
Length: 540
MNVPVPPSRPPSAPRAGALRAAALALGLTAAASVCAQPAAGAGQTLRIQINSDIRSTDPGGNRDDNTDNVLLHVGEGLVALREDTSVGPMLASKVDTSADGLTYTFTLRDGVKFQNGATLTADDVVWNWQRYLKPATNWRCLPEFDGKGMTKVLSVEAPNPKTVVFKLERASALFLTMMARPDCGSSAIVHRSSVGPDGQWKEPVGTGPYKLKEWKRGQYVELTRFDGYSSRAEPRDGLTGGKKAEVENLRFVVIPDSAAAKAALYSGGIDAFISPSPSDVIEMRKRSDVLVDTTPVMTMVALLLQTNDPVLKDVRIRRALALALDTPEIARSVTEGLSAVNNSVVPSSSPYYDAVQGSGFKRDLTAAKKLLAEAGYRGQSIRMIANKRYEALYSAAVLVQAMASEAGINVELEVLDWATQLDRYTKGQYQSMAFVYSARIDPALNYEMVSGDKAAQPRKVWDSPYAQTRLTEAMVSRDKARRQALFDEMHKQMLQDVPMIVLFNASDATAMRKNVVGFKGWAPAKPRFWNVRLAAAAG*