ggKbase home page

SCNpilot_cont_300_bf_scaffold_189_curated_176

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 225520..226488

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036352D2 similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 311.0
  • Bit_score: 528
  • Evalue 5.60e-147
GntR family transcriptional regulator {ECO:0000313|EMBL:EXF93568.1}; TaxID=1042209 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens HK44.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 297.0
  • Bit_score: 222
  • Evalue 7.10e-55
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 288.0
  • Bit_score: 195
  • Evalue 3.60e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGATCGGGGCCCAGACCGTGATTCCGGAGACCCCTTCGATGGCCGCAGCACAGATGGAGAAGCCCCGTGCGTCGATACCGCCGCTCACCCAGCGCGTGAGCCGCTACATCCTCGACCAGGCGCTGGCCGGCGGCTACGAGAACGGCCGCCACATGACCGAGGCCGACCTTGCCGGCCGGCTCGGCATTTCGCGCACGCCGGTGCGCGCCGCACTGCGCTTCCTGCATGAGCGCCAGCTGCTGGCCCATGTGCCCAACCGGGGCTACACCCTCGTCGCCGACCGCGAGGCGCTGGGCCTGGCCCGGCGCGAGATGCCGGAGGACGAGGAAAAGACGCTCTACTACCGCCTGCTGCGCGACCGCCTGTCCGGCAAGCTGCCCACCCGCGTCAACGAGCTGGAGCTGGCGCAGACCTACGCTGTGCCGCGCCCCTTGCTGCGCACCGTGCTCACCACACTGCTGCAGGACGGCGTGCTGCGCGGGCGGCACTACCAACGCTGGGAGTTCACCGAGACGCTCGACTCGGTCGAGAGCGAGCGCGAGAGCTACCGCTTCCGCCTGACGGTCGAATGCGCCGCCCTGCGCGAGCCGGGCTTCAAGGTCGACCATGAACGCCTGCTGGCCTGCCGCGAGCGGCAGCAGGGGCTGCTGGCGCATGCGTCGCGCTATTCGTGGATGGACTTCTTCGAGGCCAACGCGCAGTTCCACGAGCTGCTGGCCAGCGCCTCGGGCAACCGCTTCATCCTGGACGCGGTGCGCCAGCAGAACCGGCTGCGCCGCATGTCCGACCTGTCGGACTACCCGCTGGTGAACATCGACCTGCTGCACAAGTCGTGTCACGAGCATCTGGAGATCCTCGACGCGGTCGAGGACCACGACCTGGAAACCGCCGCCGAGCGCATGCACTCCCACCTGAGCCGCGCCAGCGACCTGCTCGAACGCCGCGTGATGGGCGTTCTGGGCGACTGA
PROTEIN sequence
Length: 323
MIGAQTVIPETPSMAAAQMEKPRASIPPLTQRVSRYILDQALAGGYENGRHMTEADLAGRLGISRTPVRAALRFLHERQLLAHVPNRGYTLVADREALGLARREMPEDEEKTLYYRLLRDRLSGKLPTRVNELELAQTYAVPRPLLRTVLTTLLQDGVLRGRHYQRWEFTETLDSVESERESYRFRLTVECAALREPGFKVDHERLLACRERQQGLLAHASRYSWMDFFEANAQFHELLASASGNRFILDAVRQQNRLRRMSDLSDYPLVNIDLLHKSCHEHLEILDAVEDHDLETAAERMHSHLSRASDLLERRVMGVLGD*