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SCNpilot_cont_300_bf_scaffold_189_curated_182

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 231023..231802

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus B4 RepID=T1X8P6_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 252.0
  • Bit_score: 401
  • Evalue 4.90e-109
transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 252.0
  • Bit_score: 401
  • Evalue 1.50e-109
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGU49307.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 252.0
  • Bit_score: 401
  • Evalue 6.90e-109

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGAAGGCGCCGTGCAGGTCGAGGCCATGTTCTCGGCCGACCCCAAGGCGCATTTCGAACTGCACTGGCATGCCGAGTGGAGCGTGGGCGCGATTCTCGAAGGGCGCTGCGAATTCACCTGCGCCGGCGAACGGCGCATTGCCGGAGCGGGCGACATCGTGCTGATGGCGCCCTTCATGCTGCACACGGCCGGTGTGAGTGCGCAGGGCTTTCGCATGGTGATGCTGTATGTGCCGCATGCATGGGCCGAGGCGCGCCTCGGATGGCCTGTCGGGCTGCGCGGCGAGTTGCTGAACGGCGTGTGGCATGACGCGGCGATGGCCGACGCGCTCGCCTGCGCCGCGCGGTCCGGAGACGGCGTGGCGGTCGGGCGGCTGCTGGAGCACGTCTTGCGCGCGCAGACCGGCCGCGAGCTGGTGCCGGTCGAGCGCCGCGCGGGCGACGAGCGCGTCGAGGCGATCTGCACCGCGCTGGAGACCGAAGACGCCTGCCGCATCGACCCGGGCGCGCTGGCGTCGCGGCTCGGGGTGTCGAGGGAGCACTTCCATCGCCTGTTCCGTGTCGCCGTCGGCATGGCGCCGGCCCACTATGCGCGGCTTGCCCGCATCGGCCGGGCCAAGGCCCTGCTGCGCGAAGGCCGCGCGCAGGCCGACGTGGCGGCGCAATGCGGCTTTGCCGACCAGGCGCATTTTTCGCGGTGGTTCCGTCGCTGCTTCGGCGTGACTCCGGGCAACTACATGGCACGGGAGCCCCGATGCGGGTCTCTACCGATTGAATGA
PROTEIN sequence
Length: 260
MEGAVQVEAMFSADPKAHFELHWHAEWSVGAILEGRCEFTCAGERRIAGAGDIVLMAPFMLHTAGVSAQGFRMVMLYVPHAWAEARLGWPVGLRGELLNGVWHDAAMADALACAARSGDGVAVGRLLEHVLRAQTGRELVPVERRAGDERVEAICTALETEDACRIDPGALASRLGVSREHFHRLFRVAVGMAPAHYARLARIGRAKALLREGRAQADVAAQCGFADQAHFSRWFRRCFGVTPGNYMAREPRCGSLPIE*