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SCNpilot_cont_300_bf_scaffold_189_curated_183

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 231849..232529

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0BAB6_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 215.0
  • Bit_score: 325
  • Evalue 3.90e-86
TetR family transcriptional regulator {ECO:0000313|EMBL:EJC63110.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 215.0
  • Bit_score: 325
  • Evalue 5.50e-86
bacterial regulatory s, tetR family protein similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 187.0
  • Bit_score: 191
  • Evalue 2.80e-46

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Taxonomy

Alcaligenes faecalis → Alcaligenes → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGGCCTACAGACAGACCGCTGCCGTCGAAGCCCGCCTGCAGGACAACCGCACCCGCATCCTGCGGGTTGCCCGCTCACTGGTGAGCGAGGGCGGCTGGAGGGAGGCGCAGGTCGCCAGCGTCGCCGCGGCGGCCGGCATTGCCACCGGCACGGTGTACCGCTACTTCCCGTCCAAGGCCGAGCTTTTCGCCGAGGTGCTGTCCGCCGTGTCGCAGCGCGAAGTGGACGTGCTGGCCGAGATCGCCGCGACGCACGACTCGGCCCTGGGCCGGTTGCGCTCGGCCGTGGCGACCTTCGTGCGGCGGGCCATGCGCAACCCGCGCCTGGCTTACGCGCTGATCGCGGAGCCGTGCGACAAGGAGATCGACGAGGTCCGGCTGGTGTACCGGGCTGCGATCAGCGAGGTGATACGCGCCATCGTCGCGTCGGGGCAGTCATCGGGGGAAATGACGCCTGACATGCAGCCCGAGATTGCCGCCTCCGTCATCGTGGGCGGGTTCATGGAGGGGCTGATCGGGCCGCTGTCGCCCCTCAGCCGCCAGCAGCACCAGGACACGGACGACTACCAGCGTGAAGTGGCCATGCTGGCGGACCAGATCGCCAGGCTGGCGTGCGCCAGCGTGTCGGCTTCTTCCGCTTCTCCCGCCACGGTTCGGAAACTCTCTCGGAGACCCCCATGA
PROTEIN sequence
Length: 227
MAYRQTAAVEARLQDNRTRILRVARSLVSEGGWREAQVASVAAAAGIATGTVYRYFPSKAELFAEVLSAVSQREVDVLAEIAATHDSALGRLRSAVATFVRRAMRNPRLAYALIAEPCDKEIDEVRLVYRAAISEVIRAIVASGQSSGEMTPDMQPEIAASVIVGGFMEGLIGPLSPLSRQQHQDTDDYQREVAMLADQIARLACASVSASSASPATVRKLSRRPP*