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SCNpilot_cont_300_bf_scaffold_132_curated_4

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3841..5172

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthesis protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034D1294 similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 437.0
  • Bit_score: 717
  • Evalue 6.90e-204
CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 437.0
  • Bit_score: 711
  • Evalue 1.60e-202
CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase {ECO:0000313|EMBL:AFT84798.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 437.0
  • Bit_score: 711
  • Evalue 6.90e-202

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Taxonomy

Burkholderia phenoliruptrix → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGACTGAAATCTCTTTCCAAAAAAATGAACTGCGCAAGAAGATCCTTGCGCTGGTGGCCGAATACGGCGAATTGGCCAGTGCTCCCGCTTCCTTTGTTCCGGGCGAGACCCTGATTCCGCCGTCGGGCAAGGTCGTCGGTACACCGGAAATGCAGTTGATGGTCGATGCCTCGCTCGACGCATGGCTGACGACCGGGCGTTTCAACACGCTGTTCGAAAGTCGGTTGGCCGCCTATCTGGGCGTCAAGCACCTTATGACCGTGAACTCCGGATCGTCGGCAAATCTGGTGGCGTTCTCCGCGCTGACTTCCCCCAAGCTGGGCGACCGGGCGATCCGGCCCGGCGATGAAGTGATCGGCGTGGCGGCGGGATTCCCCACCACAGTGAATCCGATCCTGCAGTGCGGCGCCGTGCCGGTGTTCGTGGATGTGCATATTCCCACCTACAACATCGATGCGGATCAATTGGAGGCGGCGATCGGTCCGCGGACCAAGGCGATCATGCTCGCGCATACCCTGGGCAATCCGTACAACCTGAAAGTCGTCAAGGCCGCCTGCGAAAAGCATGGGCTCTGGCTGGTGGAAGACTGCTGCGATGCACTCGGTGCCCGTTACGAAGGGCAGATGGTCGGTACCTTCGGCGACATCGGGACATTGAGCTTCTACCCCGCCCATCACATCACCATGGGCGAAGGCGGCGCGGTGTTCACCAATAACGATGAGCTGCGGCTGATTGCCGAATCCATCCGGGACTGGGGCCGCGATTGCTATTGCCCGCCTGGCAAAGACAACACCTGCGGCAAACGTTTTTGCTGGAAGCTCGGCGATCTGCCCGAAGGCTACGACCACAAGTACACGTACTCCCATCTGGGCTACAACCTCAAGATCACCGATATGCAGGCGGCATGCGCGCTGGCGCAACTCGACCGGCTCGATGGTTTCGTGGCGGCGCGCAAAAAGAATTTTGCTTACCTCAAGGACCGTCTGAGCAGCTGTGAAGAGTTCCTGGAATTGCCCGAGCCCACGCCCGGCTCCGAGCCGTCATGGTTCGGTTTCCCGATCACGCTGCGTGAAGCTGCCAACACCCGGCGCGTCGATCTGCTGACCTATCTCGACCAGCAGAAAGTCGGTACGCGGCTCTTGTTTGCAGGCAACCTGCTGCGTCAGCCTTACATGATCGGCCGCAACTACAGGGTGGTCGGCGAACTGAAGAACACGGATCGGATCATGAACGATACGTTCTGGATCGGCGTTTACCCCGGCCTGACCGAGGCCATGCTCGACCATTCCGTCGCCAGCATCGAGACCTATCTCGGCTTGCGTTTTGACTGA
PROTEIN sequence
Length: 444
MTEISFQKNELRKKILALVAEYGELASAPASFVPGETLIPPSGKVVGTPEMQLMVDASLDAWLTTGRFNTLFESRLAAYLGVKHLMTVNSGSSANLVAFSALTSPKLGDRAIRPGDEVIGVAAGFPTTVNPILQCGAVPVFVDVHIPTYNIDADQLEAAIGPRTKAIMLAHTLGNPYNLKVVKAACEKHGLWLVEDCCDALGARYEGQMVGTFGDIGTLSFYPAHHITMGEGGAVFTNNDELRLIAESIRDWGRDCYCPPGKDNTCGKRFCWKLGDLPEGYDHKYTYSHLGYNLKITDMQAACALAQLDRLDGFVAARKKNFAYLKDRLSSCEEFLELPEPTPGSEPSWFGFPITLREAANTRRVDLLTYLDQQKVGTRLLFAGNLLRQPYMIGRNYRVVGELKNTDRIMNDTFWIGVYPGLTEAMLDHSVASIETYLGLRFD*