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SCNpilot_cont_300_bf_scaffold_132_curated

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Displaying items 1-30 of 264 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_132_curated_1
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1191)
DNA (1191bp) protein (397aa)
Capsular polysaccharide biosynthesis protein-like protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M215_METRJ
capsular polysaccharide biosynthesis protein-like protein
Capsular polysaccharide biosynthesis protein-like protein {ECO:0000313|EMBL:ACB23200.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_300_bf_scaffold_132_curated_2
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1996..2769
DNA (774bp) protein (258aa)
nucleotidyl transferase; K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
Nucleotidyl transferase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124Y9_POLSJ
Nucleotidyl transferase {ECO:0000313|EMBL:ABE45903.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCNpilot_cont_300_bf_scaffold_132_curated_3
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2751..3848
DNA (1098bp) protein (366aa)
CDP-glucose 4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
CDP-glucose 4,6-dehydratase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WX03_9BURK
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KHA80294.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
SCNpilot_cont_300_bf_scaffold_132_curated_4
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3841..5172
DNA (1332bp) protein (444aa)
lipopolysaccharide biosynthesis protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034D1294
CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase
CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase {ECO:0000313|EMBL:AFT84798.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;"
SCNpilot_cont_300_bf_scaffold_132_curated_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5213..6208
DNA (996bp) protein (332aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHJ6_SINAD
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGA28156.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_cont_300_bf_scaffold_132_curated_6
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6234..7046
DNA (813bp) protein (271aa)
transketolase domain-containing protein; K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Burkholderia kururiensis RepID=UPI000344E879
Transketolase {ECO:0000313|EMBL:KHA80416.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
SCNpilot_cont_300_bf_scaffold_132_curated_7
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7043..7960
DNA (918bp) protein (306aa)
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase-like protein n=1 Tax=Microcystis aeruginosa (strain NIES-843) RepID=B0JSN2_MICAN
Transketolase {ECO:0000313|EMBL:AJP48542.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_cont_300_bf_scaffold_132_curated_8
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7962..8327
DNA (366bp) protein (122aa)
GtrA family protein n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DN06_9BURK
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:AFT84794.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;"
SCNpilot_cont_300_bf_scaffold_132_curated_9
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8324..9271
DNA (948bp) protein (316aa)
dolichol monophosphate mannose synthase n=1 Tax=Burkholderia kururiensis RepID=UPI000349CC7B
Glycosyl transferase family 2 {ECO:0000313|EMBL:EDT04267.1}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria IOP40-10.;"
glucosyll transferase family protein
SCNpilot_cont_300_bf_scaffold_132_curated_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9275..9976)
DNA (702bp) protein (234aa)
ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8M6_VARPE
ABC transporter; K09691 lipopolysaccharide transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADU35009.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_132_curated_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9980..10783)
DNA (804bp) protein (268aa)
ABC-2 type transporter n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8M7_VARPE
ABC transporter; K09690 lipopolysaccharide transport system permease protein
ABC-2 type transporter {ECO:0000313|EMBL:ADU35010.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_132_curated_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11188..12996
DNA (1809bp) protein (603aa)
glycosyl transferase family 2 n=1 Tax=Variovorax paradoxus RepID=UPI00036FEADB
Putative glycosyltransferase {ECO:0000313|EMBL:EJL67889.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
glycosyl transferase family protein
SCNpilot_cont_300_bf_scaffold_132_curated_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12996..13979
DNA (984bp) protein (328aa)
Glycosyl transferase n=1 Tax=Variovorax sp. CF313 RepID=J2JJ06_9BURK
Glycosyl transferase {ECO:0000313|EMBL:EJL67890.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative glycosyltransferase, family 2
SCNpilot_cont_300_bf_scaffold_132_curated_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13980..14741)
DNA (762bp) protein (254aa)
Putative glycosyltransferase n=1 Tax=Variovorax sp. CF313 RepID=J3CB25_9BURK
Putative glycosyltransferase {ECO:0000313|EMBL:EJL67891.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
family 2 glycosyl transferase; K07011
SCNpilot_cont_300_bf_scaffold_132_curated_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14787..15884
DNA (1098bp) protein (366aa)
glycosyl transferase n=1 Tax=Variovorax paradoxus RepID=UPI0003655C24
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:EJL67892.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
glycosyl transferase family protein
SCNpilot_cont_300_bf_scaffold_132_curated_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15992..16885
DNA (894bp) protein (298aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8]
Acetylglutamate kinase n=1 Tax=Variovorax sp. CF313 RepID=J2K3R0_9BURK
SCNpilot_cont_300_bf_scaffold_132_curated_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16963..17613
DNA (651bp) protein (217aa)
dihydroorotate oxidase n=1 Tax=Variovorax paradoxus RepID=UPI000376A246
Transcriptional regulator {ECO:0000313|EMBL:EJL67895.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
transcriptional regulator, TetR family
SCNpilot_cont_300_bf_scaffold_132_curated_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17865..18686
DNA (822bp) protein (274aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00036E4300
Putative permease, DMT superfamily {ECO:0000313|EMBL:EJL67898.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_132_curated_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18704..19759)
DNA (1056bp) protein (352aa)
malate/L-lactate dehydrogenase; K13574 uncharacterized oxidoreductase [EC:1.1.1.-]
Malate/lactate dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CAY2_9BURK
Malate/lactate dehydrogenase {ECO:0000313|EMBL:EJL67899.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_132_curated_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19763..20695)
DNA (933bp) protein (311aa)
smp-30/gluconolaconase/lre-like region-containing protein; K01053 gluconolactonase [EC:3.1.1.17]
Gluconolactonase n=1 Tax=Variovorax sp. CF313 RepID=J2JJ15_9BURK
Gluconolactonase {ECO:0000313|EMBL:EJL67900.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_132_curated_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20722..22260)
DNA (1539bp) protein (513aa)
galactarate dehydratase (EC:4.2.1.42); K01685 altronate hydrolase [EC:4.2.1.7]
Altronate dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J3CB32_9BURK
Altronate dehydratase {ECO:0000313|EMBL:EJL67901.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_132_curated_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22295..23002)
DNA (708bp) protein (236aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2SQS1_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL67902.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_132_curated_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23113..23847
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K3S1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL67903.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
short-chain dehydrogenase/reductase sdr
SCNpilot_cont_300_bf_scaffold_132_curated_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23844..24590
DNA (747bp) protein (249aa)
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9I2_VARPE
Variovorax paradoxus strain MEDvA23 contig_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29576.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_cont_300_bf_scaffold_132_curated_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24617..25465
DNA (849bp) protein (283aa)
ureidoglycolate lyase (EC:4.3.2.3)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Variovorax sp. CF313 RepID=J3CAY4_9BURK
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:EJL67904.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_132_curated_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25493..26344
DNA (852bp) protein (284aa)
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9I4_VARPE
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADU35032.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_132_curated_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26354..27241)
DNA (888bp) protein (296aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KLX6_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL74073.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_132_curated_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27358..28116
DNA (759bp) protein (253aa)
oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI0003689058
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACS17461.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_132_curated_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28257..28955
DNA (699bp) protein (233aa)
TetR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000379E405
Transcriptional regulator {ECO:0000313|EMBL:EJL74075.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_132_curated_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29026..30822
DNA (1797bp) protein (599aa)
Acyl-CoA dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CLR5_9BURK
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJL74076.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
acyl-CoA dehydrogenase domain-containing protein
Displaying items 1-30 of 264 in total

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