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SCNpilot_cont_300_bf_scaffold_132_curated_24

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 23844..24590

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 248.0
  • Bit_score: 466
  • Evalue 6.40e-129
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9I2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 248.0
  • Bit_score: 466
  • Evalue 2.00e-128
Variovorax paradoxus strain MEDvA23 contig_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29576.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 248.0
  • Bit_score: 468
  • Evalue 7.50e-129

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGAACCAGCTCGACTTCACCGGCCGCCATGCGGTCGTCACCGGCGGCGCAACGGGCCTGGGCTTCGGCATCGCGCGGCGGCTGCTGGCGTCGGGCGGCAGCGTCACGCTGTGGGACCGCGACGAGGAAGCGGCGCGCAAGGCGGCCGAGTCGCTCGGAGACAGGGCCTTCGCGCTGAAGGTCGACGTGTCGCAGCAGCCTTCGGTGGCCAAGGCCGTCGCGGCCACGCTGGCGCGGGTGCCGCGCATCGACGCGCTGGTCAACAGCGCCGGCATCACGGGCCCGAACAGCAAGCTGTGGGACTACCCGGTGGACGACTGGCGCCAGGTGATGGACGTCAACATCAACGGCGTGTTCCTGTGCTGCCGCGAGGTGGTCGCGCAGATGCGAAAGCAAGGCTATGGCCGCATCGTCAACATCGCCTCGGTGGCAGGCAAGGACGGCAACCCCAACGCCAGCGCCTACAGCGCGAGCAAGGCGGCCGTCATCGGCATGACCAAGTCGCTCGGCAAGGAGCTGGCCGACACCGGCATCCGCGTGAACTGCGTGACGCCCGCGGCGGTGAAGACGGCCATCTTCGAGCAGATGACGCCCGAGCACATCGCCTTCATGCTCTCGAAGATTCCCATGGGCCGCTTCGGCACGGTGGAAGAAGTGGCCGCGATGGTCGGCTGGCTCTGCACCGAAGACTGTTCGTTCTCCACCGGCGCGGTCTTCGACCTCTCCGGCGGCCGCTCCACGTACTGA
PROTEIN sequence
Length: 249
MNQLDFTGRHAVVTGGATGLGFGIARRLLASGGSVTLWDRDEEAARKAAESLGDRAFALKVDVSQQPSVAKAVAATLARVPRIDALVNSAGITGPNSKLWDYPVDDWRQVMDVNINGVFLCCREVVAQMRKQGYGRIVNIASVAGKDGNPNASAYSASKAAVIGMTKSLGKELADTGIRVNCVTPAAVKTAIFEQMTPEHIAFMLSKIPMGRFGTVEEVAAMVGWLCTEDCSFSTGAVFDLSGGRSTY*