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SCNpilot_cont_300_bf_scaffold_132_curated_26

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 25493..26344

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9I4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 276.0
  • Bit_score: 417
  • Evalue 9.50e-114
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 276.0
  • Bit_score: 417
  • Evalue 3.00e-114
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADU35032.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 276.0
  • Bit_score: 417
  • Evalue 1.30e-113

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGACGAGAACGCCGCCGGACCATCGCTCGCAAGTCTTCGGCACGCCCTGGGAGGGCGTGCACGGCACAGCGATGGACAGTGCCCGCCACTATGGCCGGCACTGGCACGCGACCTACGGCGTCGGTTTGCTCGACCACGGCGCGCAAAGCTCGGCCAGCGGCCGAGGCAAGGTCGACGCCTATGCCGGCGACCTGATCACCACCAACCCCGGGGAAGTGCATGACGGCCGTCCGCTGGGCGGCCCGTCGCGGCGTTGGCGCATGGTGTATTTCGATGCGGCCGTGATGGCGGGCATGCGCGGCGATGACACCGGCGGCCATGACGTCGAGCTCACGCGCCCGGTGCTGCGGGACTCGCGCTTGAGCGGGGCGCTGCGCAGCCTGTTCGTGCGGCTCGATGAATGGCAGGCCCTGCATGCGAGCCGCGCCGCCACAGCCGAAGCGCTGGCCTGCGAAGAGTCCTTGGCCGAGGTCTGCGGCCTGCTGCTCGAGGCCCACTCCACCGCGCTGTCGCTGCGCGAGACCGGCGGCGATGTGCGCCGGCTGCGCGAGCGTCTTGCCGACGACCTGCTCGATGCTCCTTCGCTCGAACAGCTTGCCGCGATGGCCGGCCTCAGCAAGTTCCAGGTGCTGCGCCGTTTCGAGAAAGCCTACGGCGTGCCGCCGCATGCCTGGCTGCTGCTGCAGCGCGGCGAGCGTGCGCGCGCCCTGATCCGCCGCGGCGAGAGCCTCGCCGGCGCGGCGGCCGCCAGCGGCTTCGCGGACCAGAGCCACATGACGCGCGTCTTCACACGCCACTTCGGCTTCACGCCCGGGGCCTGGCAGCGGGCACGCGTTCTGTCCTCGCAGTAG
PROTEIN sequence
Length: 284
MTRTPPDHRSQVFGTPWEGVHGTAMDSARHYGRHWHATYGVGLLDHGAQSSASGRGKVDAYAGDLITTNPGEVHDGRPLGGPSRRWRMVYFDAAVMAGMRGDDTGGHDVELTRPVLRDSRLSGALRSLFVRLDEWQALHASRAATAEALACEESLAEVCGLLLEAHSTALSLRETGGDVRRLRERLADDLLDAPSLEQLAAMAGLSKFQVLRRFEKAYGVPPHAWLLLQRGERARALIRRGESLAGAAAASGFADQSHMTRVFTRHFGFTPGAWQRARVLSSQ*