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SCNpilot_cont_300_bf_scaffold_132_curated_21

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(20722..22260)

Top 3 Functional Annotations

Value Algorithm Source
galactarate dehydratase (EC:4.2.1.42); K01685 altronate hydrolase [EC:4.2.1.7] similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 512.0
  • Bit_score: 993
  • Evalue 3.10e-287
Altronate dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J3CB32_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 512.0
  • Bit_score: 1000
  • Evalue 4.70e-289
Altronate dehydratase {ECO:0000313|EMBL:EJL67901.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 512.0
  • Bit_score: 1000
  • Evalue 6.60e-289

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGACTCCCTACATCAGACTCCATCCCGCCGACGACGTCGTCATCGCGCGCTCCCAGCTGCTCGGCGGCACCACCGTGGAGAACGTGGCCGTGCGCGGCCTGATCCCGCCGGGCCACAAGATCGCGATGCGCGACATCGCGCAGGGCGAGCCGGTGCGCCGCTACAACCAGATCATCGGGTTCGCGAGCCGGCCCATCGCCGCCGGCGAGCATGTGCACACGCAGAACCTGAACATGGGCCCGGACAAGGGCGCCAGTACCGGAGACTTCGAGCGCGACTACGCCTTCGGCGCCGACGTGAAGCCCGCGCCCGCCAGGCGCGAAGCCACCTTCATGGGCATCAAGCGTGCGGACGGCCGCGTGGCCACGCGCAACTACATCGGCGTGCTGACCAGCGTGAACTGCTCGGCCACGGCCGCGCGCGCCATTGCCGACCACTTCTCGCGCAAGACCAACCCGCAGGCGCTGGCCGCGTTCCCGAACGTCGACGGCGTGATCGCGCTCACGCACGGCACCGGCTGCGGCATGGACACGCAGGGCATGGGCATGCAGATCCTGGAGCGCACGCTGACGGGCTACGCCACGCATCCGAACTTCGCGGGCGTGCTGGTGGTCGGCCTGGGCTGCGAGGCCAACCAGATCAACGCCTGGCTCGCGACCGGCCACCTGGCCGAGGGCGAGAACTTCCGCACCTTCAACATCCAGGACACGGGCGGCACGCGCAAGACGGTCGAGAAAGGCGTGGCGCTCATCGAGGAGATGCTGCCGCGCGCCAACGCGGTGAAGCGCGAGCCCTGCAGCGCGGCGCACATCACCATCGGGCTGCAGTGCGGCGGCTCGGACGGCTACTCGGGCATCAGCGCCAACCCGGCGCTGGGCGCGGCGGTCGACCTGCTGGTGGCGCACGGCGGCACGGCCATCCTCAGTGAGACGCCCGAGGTGTACGGCGCCGAGCACCTGCTCACGCGCCGCGCGGTGAAGCGCGAGGTCGGCCAGAAGCTGGTGGACCGCATCAAGTGGTGGGAGCACTACACCGAGATCAACCAGGGCGAGATGAACAACAACCCCTCGCCGGGCAACAAGGCGGGCGGGCTCACCACCATCCTCGAGAAGTCGCTGGGCGCGGTGGCCAAGGGCGGCACCAGCAACCTCGAGGCGGTGTACGAATACGCGGAGCCGGTCACCGCGCACGGCTTCGTCTACATGGACACGCCAGGCTACGACCCGGTGAGCGCCACGGGCCAGGTGGCCGGCGGCGCCAACCTCATCTGCTTCACCACGGGGCGCGGCTCGGCCTACGGCTGCGCGCCCTCCCCCTCGCTCAAGCTGGCGACCAACTCGGCGCTGTGGCAGCGGCAGGAGGAAGACATGGACATCAACTGCGGCGAGATCGTCGACGGCACAGCGTCCATCCAGGAGATGGGCCAGCGCATCTTCGAGCTGGTGCTGGCCACCGCCTCGGGCGCGCACTCCAAGAGCGAACAGCACGGCTACGGACAGAACGAGTTCGTGCCGTGGCAGGTCGGCGCGGTGATGTAG
PROTEIN sequence
Length: 513
MTPYIRLHPADDVVIARSQLLGGTTVENVAVRGLIPPGHKIAMRDIAQGEPVRRYNQIIGFASRPIAAGEHVHTQNLNMGPDKGASTGDFERDYAFGADVKPAPARREATFMGIKRADGRVATRNYIGVLTSVNCSATAARAIADHFSRKTNPQALAAFPNVDGVIALTHGTGCGMDTQGMGMQILERTLTGYATHPNFAGVLVVGLGCEANQINAWLATGHLAEGENFRTFNIQDTGGTRKTVEKGVALIEEMLPRANAVKREPCSAAHITIGLQCGGSDGYSGISANPALGAAVDLLVAHGGTAILSETPEVYGAEHLLTRRAVKREVGQKLVDRIKWWEHYTEINQGEMNNNPSPGNKAGGLTTILEKSLGAVAKGGTSNLEAVYEYAEPVTAHGFVYMDTPGYDPVSATGQVAGGANLICFTTGRGSAYGCAPSPSLKLATNSALWQRQEEDMDINCGEIVDGTASIQEMGQRIFELVLATASGAHSKSEQHGYGQNEFVPWQVGAVM*