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SCNpilot_cont_300_bf_scaffold_132_curated_28

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 27358..28116

Top 3 Functional Annotations

Value Algorithm Source
oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI0003689058 similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 252.0
  • Bit_score: 464
  • Evalue 7.80e-128
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 252.0
  • Bit_score: 460
  • Evalue 3.60e-127
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACS17461.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 252.0
  • Bit_score: 460
  • Evalue 1.60e-126

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGACATCCGTTCAAGACAACATCAAAGGCAAGGTCGCCATCGTCACCGGCGCGAGCAGCGGGCTCGGCGAATCGACCGCGCGCCACCTGGCCGCGCGCGGCGCCAGGGTCGTGCTCGCGGCCCGCCGCACCGAGCGGCTCGAGAAGCTTGTCGCCGAAATCCGCGAAGCCGGCGGCGAGGCCATCGCCGTGGCCACCGACGTGGCCAAACGCGCCGATCTCGAAAAGCTCGCAGTCGCCACGGTGGAAGCCTTCGGCCGCATCGACGTGCTGGTCAACAACGCGGGCGTGATGCCGCTGTCGCCCATCGAGAAGCTCAAGGTCGACGAGTGGGACCGCACCATCGACGTCAACATCAAGGGCGTGCTGTACGGCATCGCCGCCGTGCTGCCGCGCATGCAGGCGCAGGGCAGCGGGCACATCGTCAACATCGCGTCGATCGCCGGGCTGAAGGTGTTCACGCCCATCGGCACCGTCTACAGCGCGACCAAGTACGCGGTGCGCGCCATCTCCGAAGGGCTGCGCGTCGAAATGGGCAACAGCGGCGTGCGCGTGACCGTCGTGTCGCCCGGCGCGGTGGAGTCGGAACTGAAGTTCGGCAGCACCGACGCCGAGAGCGCAGCCGGCGTGAAGGCGTTCTACGAAGCCAACCAGATCCCGGCGGATTCGGTGGCGCGCGCCGTCGTCTACGCGGTGGAGCAGCCGGCGGACGTGGACATCAACGAAGTGGTGCTGCGGCCGGTGTCGCAGGAGTTCTGA
PROTEIN sequence
Length: 253
MTSVQDNIKGKVAIVTGASSGLGESTARHLAARGARVVLAARRTERLEKLVAEIREAGGEAIAVATDVAKRADLEKLAVATVEAFGRIDVLVNNAGVMPLSPIEKLKVDEWDRTIDVNIKGVLYGIAAVLPRMQAQGSGHIVNIASIAGLKVFTPIGTVYSATKYAVRAISEGLRVEMGNSGVRVTVVSPGAVESELKFGSTDAESAAGVKAFYEANQIPADSVARAVVYAVEQPADVDINEVVLRPVSQEF*