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SCNpilot_cont_300_bf_scaffold_132_curated_11

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9980..10783)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8M7_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 267.0
  • Bit_score: 529
  • Evalue 1.60e-147
ABC transporter; K09690 lipopolysaccharide transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 267.0
  • Bit_score: 529
  • Evalue 5.10e-148
ABC-2 type transporter {ECO:0000313|EMBL:ADU35010.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 267.0
  • Bit_score: 529
  • Evalue 2.30e-147

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGAGCCAAGTTCACTCCAACCTTCACCGCAGCGCGCTGGCCGACTGGTGGGGAGGTACACGCCGCACGGACATCTGGTGGACCCTTGCATGGTTCGACATCGTCCTGCGCTATCGACGCTCGATGCTGGGGCCGCTGTGGCTCACGCTGAGCATGGGCGTCATGATCGGCGGCATGGGGCCGCTGTATGCCTCGCTCTTCGGCACCCATCTGGACAAGTTTTTCCCGCACCTGGCGCTCGGCGTGATCTTCTGGGGCCTCTTCTCCACTGTGGTCTCCGACGCTTGCAACGCCTTCGTAGGATCGTCCAACTACCTGAAGCAGGGTTACTTTCCGATCAGCCTGTTCGTCTGGCGAGGCCTGGCGCGCAACCTGATCCAGTTCGCCCATCAGATCGTGCTGTACATCCCCGTCGCCCTCTGGGCCGGCGTTTCGCTTTCATGGTCGGCTTTGCTGATCATTCCCGCCTTCCTGATCCTCATCGTCAATGCACATGCGCTCGGGCTCCTGCTGGGCCTCGTTTGCACCCGTTATCGCGACGTGACCCAAATCGTCACCAGCATCATGCAGATGTTGATGTTCCTCACGCCCGTCTTCTGGCTTCCCGAGAATCTTCCGGGCCGTGCCAAGTACGTGCTGTGGAACCCCTTCGCGCAAATGCTCGACCTGCTGCGCACGCCACTGATGGGTGGCGTCGCCCACATCCACAGCTGGATCGGCATCGGCGTGTGGACCGTGTTGTGCCTGACGCTCGCGAGCGTGCTGTTCGTCAAATACCGCCGTCGCGTCGTCTACTGGCTCTGA
PROTEIN sequence
Length: 268
MSQVHSNLHRSALADWWGGTRRTDIWWTLAWFDIVLRYRRSMLGPLWLTLSMGVMIGGMGPLYASLFGTHLDKFFPHLALGVIFWGLFSTVVSDACNAFVGSSNYLKQGYFPISLFVWRGLARNLIQFAHQIVLYIPVALWAGVSLSWSALLIIPAFLILIVNAHALGLLLGLVCTRYRDVTQIVTSIMQMLMFLTPVFWLPENLPGRAKYVLWNPFAQMLDLLRTPLMGGVAHIHSWIGIGVWTVLCLTLASVLFVKYRRRVVYWL*