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SCNpilot_cont_300_bf_scaffold_118_curated_124

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(106038..106529)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CNQ4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 155.0
  • Bit_score: 298
  • Evalue 3.70e-78
Transcriptional regulator {ECO:0000313|EMBL:EJL75176.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 155.0
  • Bit_score: 298
  • Evalue 5.20e-78
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 155.0
  • Bit_score: 295
  • Evalue 9.80e-78

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGCGGGAGCCGGATAATCCTCCGATGCTCGACCTTGACCGCATCGATCTGCGCCTGCTGAAGATCCTCCAGGAAGACGGCCGCATCACCAACCTCAAGCTGGCGGAGGCGGTGGCGCTGTCGCCCACCGCGGTGCTGGCGCGCGTGCAGCGGCTCACGCGCGACGGCTTCATCCTCGGCTACGAGGCGCGGCTCGATCCGCACAAGCTGGGCCGGGGCTTCACGGTGTTCGTCGAAGTGCTGCTCGACCGCACCACGGCCAACGTGTTCGAGCAGTTCAAGGCGGCGGTTCAGGTGCGCGACGAGATCATGGAATGCCACATGGTCGCGGGCGGCTTCGACTACCTGCTCAAGACCCGCATGGCCGACATGGCCGCCTACCGCGACTTCGCCGGCACCGTCCTCTGGCAGCTGCCCGGCGTGCGGGAGACGCGAACCTACGCCGTGATGGAAGAAGTGAAGAGCAGCGCGCGGCTGCCGCTGGGGCTGTAA
PROTEIN sequence
Length: 164
MREPDNPPMLDLDRIDLRLLKILQEDGRITNLKLAEAVALSPTAVLARVQRLTRDGFILGYEARLDPHKLGRGFTVFVEVLLDRTTANVFEQFKAAVQVRDEIMECHMVAGGFDYLLKTRMADMAAYRDFAGTVLWQLPGVRETRTYAVMEEVKSSARLPLGL*