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SCNpilot_cont_300_bf_scaffold_118_curated_125

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(106626..107048)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9E2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 150.0
  • Bit_score: 182
  • Evalue 3.30e-43
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 150.0
  • Bit_score: 182
  • Evalue 1.00e-43
Variovorax paradoxus strain MEDvA23 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35634.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 148.0
  • Bit_score: 182
  • Evalue 4.70e-43

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGAAGAAGCCATCGTCCACCGCCCGCCTGCTGGCCACCACCGCCGTTGCCGCCCTGCTGGGCGCCGCCGCCGCACCCAGCTTTGCCGGCAACTACGCCGAGGGCGATCCGCGTCCGGTGCCGCTGGCCTCTTCCACCACCCGCGCCGCGGTGACCGCCGACGCGCAGCAATGGCTGAAGGCCGCGCCGACGCAGGGCTACACCGACGCCATCGCGCAGGCACCCGCCGCGGTCTCGACGAACACGCGCGCCGCCGTGGCGGCCGACACGCGCCTGTGGCTGCAGTCGGGCCTGGCGGCCAAGCAGAACGGCGAGGCCGGGGCCGATGCCGCGCAGCCGGGCTACCGCCAGGCCGCCGCCGACTACAGCAGCCGCAAGGCGGCGGCGCAGGCCCAGGCGCAGCCGGGCACCACGCTGCGCTGA
PROTEIN sequence
Length: 141
MKKPSSTARLLATTAVAALLGAAAAPSFAGNYAEGDPRPVPLASSTTRAAVTADAQQWLKAAPTQGYTDAIAQAPAAVSTNTRAAVAADTRLWLQSGLAAKQNGEAGADAAQPGYRQAAADYSSRKAAAQAQAQPGTTLR*