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SCNpilot_cont_300_bf_scaffold_984_curated_1

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(110..922)

Top 3 Functional Annotations

Value Algorithm Source
Short chain dehydrogenase(EC:1.-) {ECO:0000313|EMBL:KIH83774.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 270.0
  • Bit_score: 439
  • Evalue 3.10e-120
short chain (glucose/xylose) dehydrogenase (EC:1.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 270.0
  • Bit_score: 434
  • Evalue 2.20e-119
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM18 RepID=J2N2J9_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 270.0
  • Bit_score: 436
  • Evalue 2.50e-119

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Taxonomy

Pseudomonas batumici → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGACCCAGGTCATTGTCGTCATCGGAGCCGGATCGATCGGGCAAGCCATTGCTCGCCGCGTCAGCGCGGGCAAGCACGTCTTGCTTGCCGATCTGCGCCAAGCCAATGCAGACACTGCGGCACTGGTGCTCGGCGAGGCGGGTTTCGAGGTCACAACCGCCACAGTCGATGTCTCGTCCCGCGCTTCGGTGGAGACCCTCGTCAAGACGGCGACTGACCTCGGAGACGTGACCGGCGTCATCCATGCGGCGGGCGTCTCGCCCAGTCAGGCATCGCCGGCGACCATCCTGTCGGTGGACCTCTACGGCACCGCGCTGGTCCTGGAGTCGTTCGGCCATGTCATTGCGCGTGGCGGGTCCGGCGTCGTCATCGCATCCATGTCAGGCCACCGCTTGCCAGCACTGACGCCGGAACAGGACAAGGCGCTCGCAACCACGCCGACGGACGAACTGCTGTCGCTGTCGATGCTGCAGCCGGACCAGGTGTCCGATCCGTTGAACGCCTACCAGATCTCCAAGCGTGGCAATGCGCTGCGCGTGATGGCGGAAGCCGTGCGCTGGGGCCGGCGCGGCGCGCGGGTCAACACCATCAGTCCGGGAATCATCGTCACGCCGCTTGCCAAGGACGAACTGGCCGGGCCACGCGGTGCGGGGTATCGCCGCATGCTGGAAGGCTCGGCGGCAGGCCGTGCCGGCACACCCGACGAGGTAGGCGCACTCGGTGCATTCCTGATGGGCCCGGATGGCGCTTTTGTTACCGGCAGCGACTTTCTGATGGACGGCGGTGTCACCGCCGCCCACTGGTACGGATAG
PROTEIN sequence
Length: 271
MTQVIVVIGAGSIGQAIARRVSAGKHVLLADLRQANADTAALVLGEAGFEVTTATVDVSSRASVETLVKTATDLGDVTGVIHAAGVSPSQASPATILSVDLYGTALVLESFGHVIARGGSGVVIASMSGHRLPALTPEQDKALATTPTDELLSLSMLQPDQVSDPLNAYQISKRGNALRVMAEAVRWGRRGARVNTISPGIIVTPLAKDELAGPRGAGYRRMLEGSAAGRAGTPDEVGALGAFLMGPDGAFVTGSDFLMDGGVTAAHWYG*