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SCNpilot_cont_300_bf_scaffold_984_curated_15

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 15479..15967

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000375C672 similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 150.0
  • Bit_score: 215
  • Evalue 3.10e-53
MerR family transcriptional regulator {ECO:0000313|EMBL:KJU77753.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 145.0
  • Bit_score: 209
  • Evalue 4.10e-51
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 146.0
  • Bit_score: 204
  • Evalue 2.30e-50

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGTCAAACCATGTGCCCACCGAGCGCCTTTGGATCATGAAAATTGGAGAACTCGCAGAGCGCACCGGCTTGGCACCCTCGCGCATTCGCTTCTATGAACGCATCGGCCTGTTCAAAGCGGTCGAGCGCCAAGCCAACGGCTACCGCGCCTACCCTGATGAAGCGGTCCTGGTTCTCAGGCTCATCACGACGGGGCAGCGCGCGGGCTTCAGCCTGGACGAGTTGCGCGCGCTGCTGCCCAGCGATCTCGCGCAGTGGGAACACGGCACGCTGCTCGACACACTGCGGCGCAAGGTGCAGGACATCGAAGCGCTGCAGGCCCAGCTTGCGCAAAGCAGGATTCATCTTCTAGAACTAGTGCAGCAGATCGAAGCCAAGCCGAAGGACATGGAGTGCGCCGCCAACGCCCGGCGCGTGCTGTCGGAAATGCGGCTGGGCGACGCGGACAGCACCCCTGCGCCAGTCGCCAAGGCCCGTCGCCGCCGCTAG
PROTEIN sequence
Length: 163
MSNHVPTERLWIMKIGELAERTGLAPSRIRFYERIGLFKAVERQANGYRAYPDEAVLVLRLITTGQRAGFSLDELRALLPSDLAQWEHGTLLDTLRRKVQDIEALQAQLAQSRIHLLELVQQIEAKPKDMECAANARRVLSEMRLGDADSTPAPVAKARRRR*