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SCNpilot_cont_300_bf_scaffold_421_curated_22

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 32137..32964

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component (Fragment) n=1 Tax=Variovorax sp. CF313 RepID=J2JHC8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 292.0
  • Bit_score: 495
  • Evalue 4.50e-137
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJL67330.1}; Flags: Precursor; Fragment;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 292.0
  • Bit_score: 495
  • Evalue 6.40e-137
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 294.0
  • Bit_score: 480
  • Evalue 2.80e-133

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAACGCCATCACGGCCCCGGCCCCCAGCGCCGCGGCGCTCAAGCTCCCCGGTTTCTGGCAACGCGCGGTGAAGCACCGCAGCTTCGTCATCGGCGGCGTGCTGGCCGCGCTGCTGCTCATCGCGGCACTCGTGTCTTTTGTCTGGACGCCGTGGTCGCCGTATGCGATGGACATGGCCAACAAGATGCAGGCGCCCACGGGCTCGCACTGGCTGGGCACCGATGCCTTCGGGCGCGACGTGGCCTCGCTGCTGCTGGTGGGCGCGCGGGCGTCCATCCTGGTAGGCATCATTGCCGTGGGCATCGGCCTGGTGGTCGGCACCGCGCTGGGCCTGCTCGCTGCCGCCAAGCGCGGCTGGGTCGAGGAAGCGGTCATGCGGCTGTCGGACTTCACGCTGGCCTTTCCCGCGATTCTCTCGGCCATCATGATGACCGCCGTGTTCGGCGCCGGCATCGTGAATGCCATCGTGGCCATCGGCATCTACAACATCCCGACCTTCGCGCGCATCACGCGCGCGTCGGCCAATGCCATCTGGTCGCGCGAGTACGTGCTGCCGAACATTTCGGCCGTGCTGATCGTGCAGATCACCATCCGCTTCGCCATCGCCATCCTCGCGGAGGCGGCGCTCTCCTACCTCGGCCTGGGCACGCAGCCGCCGCAGCCCTCATGGGGCCGCATGCTCAGCGAAGCGCAGACCCTGATGTTCCAGCAGCCACTGCTGGCGGTTTTCCCCGGCATGGCGATCGCGCTGGCGGTGCTCGGCCTGAACCTGCTGGGCGACGGCCTGCGCGACCTGCTCGATCCGCGCCTTGCCCGCGCACGCTGA
PROTEIN sequence
Length: 276
MNAITAPAPSAAALKLPGFWQRAVKHRSFVIGGVLAALLLIAALVSFVWTPWSPYAMDMANKMQAPTGSHWLGTDAFGRDVASLLLVGARASILVGIIAVGIGLVVGTALGLLAAAKRGWVEEAVMRLSDFTLAFPAILSAIMMTAVFGAGIVNAIVAIGIYNIPTFARITRASANAIWSREYVLPNISAVLIVQITIRFAIAILAEAALSYLGLGTQPPQPSWGRMLSEAQTLMFQQPLLAVFPGMAIALAVLGLNLLGDGLRDLLDPRLARAR*