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SCNpilot_cont_300_bf_scaffold_421_curated_23

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 32972..33979

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000369688A similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 332.0
  • Bit_score: 607
  • Evalue 5.80e-171
Variovorax paradoxus strain MEDvA23 contig_97, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20565.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 329.0
  • Bit_score: 560
  • Evalue 1.50e-156
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 329.0
  • Bit_score: 559
  • Evalue 9.80e-157

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGCCCCTCCTCGAAGTCAACAACCTCCAGATCGGCCTGCAGACCCAGCGCGGTCCAGCGCAGGCCGTGCGCGGCATCTCGTTCTCGCTGGAGCGCGGCGAAACGCTCGGCATCGTCGGCGAATCGGGCTGCGGCAAGTCGATCACCGTGATGTCGCTCATGGGCCTCCTGCCCTCCAGCGCGCAGGTCACGGGCAGCATCAAGCTCGACGGGCAGGAGCTCGTCGGCCTGCCCGAAAAGCAGATGTGCCAGATCCGCGGCAACCGCATCGGCATGATCTTCCAGGAGCCGATGACGGCGCTGAACCCGGTGCACACCATCGCGCGCCAGGTCGGCGAGCCGCTGCAGCTGCACCGCGGACTGACCAAGGCGCAGGCCCGCAAGGAGGCGCTGAGCCTGCTCGACCGCGTGGGCATTCCCGACGCGGCTTCGCGCCTCGATGCCTACCCGCACCAGTTCTCGGGCGGGCAACGCCAGCGCATCGGCATCGCGATGGCGCTGGCCTGTGGACCCGACCTGCTGATCGCCGACGAGCCGACGACGGCACTCGACGTGACCATCCAGAAGCAGGTGCTCGACCTGATCCAGAGCCTGGTCAAGGAAATGGGCATGGCGATGATCCTGATCTCGCACGACCTCGGCGTGATTGCCAACAGCGTGAAGCGCATGCTGGTGATGTACGGCGGCAGCGCGGTGGAAAGCGGCCCGACCGACACGGTCTTCGCCGGCCGCGCGCACCCCTACACGCGCGGCCTGTTCGCGGCGCGCCCCGCCATCGGCGCGGTGCGTGCCGGCCGGCTGCCGACCATCCGCGGCAGCGTGCCCGAGCTGGTCGACATGCCGCGCGGCTGCGCCTTCGCGGGCCGCTGCGCCCACACCATCGACCTGTGCCAGAGCACGCGGCCCCAGGCCACGCTGCTGCCGAACGACCACACGGTGCGCTGCCTGCGGCTCGGCGAGATCGCCGCGCTGAACGCCAAGGCCGCCGCCTCCGCCCTCCTCGCATGA
PROTEIN sequence
Length: 336
MPLLEVNNLQIGLQTQRGPAQAVRGISFSLERGETLGIVGESGCGKSITVMSLMGLLPSSAQVTGSIKLDGQELVGLPEKQMCQIRGNRIGMIFQEPMTALNPVHTIARQVGEPLQLHRGLTKAQARKEALSLLDRVGIPDAASRLDAYPHQFSGGQRQRIGIAMALACGPDLLIADEPTTALDVTIQKQVLDLIQSLVKEMGMAMILISHDLGVIANSVKRMLVMYGGSAVESGPTDTVFAGRAHPYTRGLFAARPAIGAVRAGRLPTIRGSVPELVDMPRGCAFAGRCAHTIDLCQSTRPQATLLPNDHTVRCLRLGEIAALNAKAAASALLA*