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SCNpilot_cont_300_bf_scaffold_403_curated_4

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(6120..7424)

Top 3 Functional Annotations

Value Algorithm Source
site-specific recombinase XerD n=1 Tax=Janthinobacterium lividum RepID=UPI00028830CC similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 424.0
  • Bit_score: 354
  • Evalue 1.20e-94
Phage integrase family protein {ECO:0000313|EMBL:CDG84022.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 423.0
  • Bit_score: 343
  • Evalue 4.90e-91
xerD2; site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 405.0
  • Bit_score: 288
  • Evalue 3.20e-75

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Taxonomy

Janthinobacterium agaricidamnosum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGGCTGAATCACCAGTGCTGAAAACCGCTGCATTTTCGAGTTCCGCCAAGAGCCCTGAAGAGCTCTTCGCCGGTGCTGATCTGAGCTTGTTCTTTGTGGAAGAAAACGACGAAGCGTTAAAGCGCGGCCAGCCCATCTTCTTCATAGATGGGCCAACCATCTTCCCTGAACCCACACTATTTATCAATGAGAACTACGTCGCGTTGGGTGGCGCACCTAGCAAAGACGCATTGAACAAACGCGGATACCAACTTAAATCTTGGTTCGAATTCTGCCAAAGCATCGGAGTCTACTGGGCGAATGCAAACGCTGAAACAAGGCGGCTCTTTCGTGATGCCTATACGGAGGCTATATCACCAAAAACAGGCCGGCCCTATGACTTAAAAGGGGTTAAGGATGCAATGGTCGTTATTCAGAAGTTCTACCAGTACTGCAGGGAAAGAGGTTGGTATTTTGGTGACATTGGAACGCAATCGGAGCAAAGTGCCGCTCCGCGATGGTCACAAGGTACAAGCGATGGGCAATGGAAAAATACAAAGGCTCGGGACCGTGACCTTCCTAAGGTTCCTCGTAGCGACAAAATCCACCCATTAACGGTCGTAAATCTTCGAACACTGTTGCACCACGTAGGGCCGCGAGCCAGCGAGCGCGGAAGTGCCGACAGATTGTCGCGTGACCGACTCGCATTCGATTTGGGATGGGTAGTGGGCCTCCGACTGGCAGAAATTATCAGTTTGAATGCCTTGCAATTCCAGAGCTTAAATCCCGACGCAGACACGCCGCTCGTCGACTTGAGCATCTCAGTAACTGGGAAAAATAAAAAAACGCGCCAAGTAACCATTCCAACATGGTTAGTTCTCGACGCCCTGTCGTACATAGACGGGGAGCGATCAGAAGCGCTAAATGGTATGACAAAAAAAGCAACAAATCAATTGCTGGTTGTTGGAACAAATGCCACAAAAAATCACGGAGCGCCTCTTGGAAAAGATGCACTTCAAAAAGTCATCCGCAAAGCCTGCTTCGACACCGGACTACTAGAAAAAATCGAAAAAAATGACACGAACTCAAAGCAAAAGTTCATCGCGCATATTCCAAAACATTCAATGCACGACCTAAGGCATACATACGCAGTCTACCAATACATCATTGAAGTCAAACTTGGCAACCCCGAGCCATGGAAAAAAATCCAATCTCAACTGGGGCACTCGGCTTTATCCACGACTATAGATACCTATCTCAAGCACGTTCAATTGTTCAGCTCGTTTAGAGGCGTTGTGGACGTTTTGAAGGCTATCAAAACATGA
PROTEIN sequence
Length: 435
MAESPVLKTAAFSSSAKSPEELFAGADLSLFFVEENDEALKRGQPIFFIDGPTIFPEPTLFINENYVALGGAPSKDALNKRGYQLKSWFEFCQSIGVYWANANAETRRLFRDAYTEAISPKTGRPYDLKGVKDAMVVIQKFYQYCRERGWYFGDIGTQSEQSAAPRWSQGTSDGQWKNTKARDRDLPKVPRSDKIHPLTVVNLRTLLHHVGPRASERGSADRLSRDRLAFDLGWVVGLRLAEIISLNALQFQSLNPDADTPLVDLSISVTGKNKKTRQVTIPTWLVLDALSYIDGERSEALNGMTKKATNQLLVVGTNATKNHGAPLGKDALQKVIRKACFDTGLLEKIEKNDTNSKQKFIAHIPKHSMHDLRHTYAVYQYIIEVKLGNPEPWKKIQSQLGHSALSTTIDTYLKHVQLFSSFRGVVDVLKAIKT*