ggKbase home page

SCNpilot_cont_300_bf_scaffold_403_curated_12

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13229..14266)

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000382A0FD similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 345.0
  • Bit_score: 661
  • Evalue 6.00e-187
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 345.0
  • Bit_score: 659
  • Evalue 7.10e-187
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADU38609.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 345.0
  • Bit_score: 659
  • Evalue 3.20e-186

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGACATTCATCGGCAAGACCGACACCCTGCTGTCGGTGGACGACCTCAAGGTGCACTTTCCGCGCGGCAAGGCTGGCTGGGGTCGCACGCCCGAGGTGGTGAAGGCGGTGGACGGCGTGTCCTTCGAGATCCGGCGCGGCACGACGCTCGCGGTGGTGGGCGAATCGGGTTCGGGCAAGACCACGACGGCACTCGCGGTGATGCGGCTGTCGCCTGTCACGTCGGGCCGCATGCGGCTCGGCGACACCGACCTGGCAGCGCTGCGCGGCGAAGCGCTGCGGCAGGCGCGAACCCGCATGCAGATCATTTTCCAGGACCCGTTCTCCTCGCTGAATCCGCGCGAGCGCGCGGGCGCCGCGGTGCGCGCGCCGCTGGACCTGATGCGGGTCGGCACGCCCGACGAGCGCACGCGCCGCGTGGCCGAGCTGTTCGAGGCAGTGGGCCTTCGACCCGAGCAGCAGCACCTGTTTCCGCACCAGTTCTCCGGCGGGCAGCGCCAGCGAATCAATATCGCGCGGGCGCTGGCCACCAACCCGGAACTGGTGGTGTGCGACGAGCCGGTGTCGGCGCTGGACATCGCGATCCGCGCGCAGATCCTGAACCTGTTGTCGCGGCTGCAGCGCGAGCTGGGGCTGACCTACCTCTTCATCTCGCACGACATGGCGGTGGTGGAGCACATCTGCGACGACATCGCCGTGATGTACCTCGGCCAGATCGTCGAGCGCGCGCCTCGGCGCAGCTTCTTCGCGCGGCCCCTGCATCCTTACAGCGTGGCGCTGATGTCGGCGGTACCCACCGTGAGCGGCGGGCGCCGACGCGCGGCCCACCGCATCAAGCTGAGCGGCGATCCGCCAAGCCCGATCGACCCACCCGCCGGCTGCCGCTTTGCAGGCCGCTGCCCGGTGGCGGAGCCGGCCTGCGCGGCCGAGCTGCCGCCGCTGCGCGAAGTCGCCCCCGATCATTGGGTACGCTGCAGGCGCGTCGACGTCGTCGACGGACTGCCGCACCCGCCTCTTTCGATTCCAGAGTTGCCATGA
PROTEIN sequence
Length: 346
MTFIGKTDTLLSVDDLKVHFPRGKAGWGRTPEVVKAVDGVSFEIRRGTTLAVVGESGSGKTTTALAVMRLSPVTSGRMRLGDTDLAALRGEALRQARTRMQIIFQDPFSSLNPRERAGAAVRAPLDLMRVGTPDERTRRVAELFEAVGLRPEQQHLFPHQFSGGQRQRINIARALATNPELVVCDEPVSALDIAIRAQILNLLSRLQRELGLTYLFISHDMAVVEHICDDIAVMYLGQIVERAPRRSFFARPLHPYSVALMSAVPTVSGGRRRAAHRIKLSGDPPSPIDPPAGCRFAGRCPVAEPACAAELPPLREVAPDHWVRCRRVDVVDGLPHPPLSIPELP*