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SCNpilot_cont_300_bf_scaffold_403_curated_16

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(17373..18986)

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000378F8CB similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 538.0
  • Bit_score: 1008
  • Evalue 2.40e-291
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 531.0
  • Bit_score: 993
  • Evalue 3.20e-287
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADU38605.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 531.0
  • Bit_score: 993
  • Evalue 1.40e-286

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1614
ATGCCGATCCGCGTTCCCGAGCTTCCAGTTTTCTCGCGCCGTGCCACCTTGCTGTCCGCCAGCTTCGCGGCGGCCGGCACCCTGCTTCCGCTGTCCGTCTTCGCGGCCGCCGAGCCCAAGCGCGGCGGCACGCTGGTGATAGGCAGCACGCAGACGCCGCGGCACCTGAACGGCGCGGTGCAGTCGGGCATCGCCACCGCCATGCCGTCGACGCAGATCTTCGCGAGCCCGCTGCGCTTCGACGACAAGTGGAACCCGCAGCCGTACCTGGCCGAGTCGTGGAAGCTGGCGGACGACGGCAAGTCGCTAACGCTCAAGCTGCGCAAGGACGCGCTGTTCCATGACGGCAAGCCCGTCACCTCGGCCGACGTGGCCTTCTCCATCCTGGCCATCAAGGCCAACCATCCCTTCACCACGATGATGGGCCCGGTCGAGAAGGTGGACACGCCCGATGCGTACACCGCCGTGGTGCGGATGAGCGTGCCGCACCCGGCCATCGTGCTGGCGATGTCGCCCGCGCTGTGCCCGATTCTTCCCAAGCACATCTACGGCGACGGGCAGGACCTGAAGAACCATCCGCGCAACACCACCGACGTGATCGGCTCGGGCCCGTACCGGGTGACCGACTTCAAGCCCGCGCAGCGCGTGGTGCTGGAGCGCTTCGACAAGTTCTTCATTCCCGGCAGGCCCTACCTCGACAAGATCATCATCAACATCACGCCCGACTCGGCGAGCCTGATGCTCGGCCTGGAGCGCGGCGACATCCAGATGGTGCCCTTCGCCACGCTGCCCACCGACCTCAAGCGCCTGGCCAACGACCCCAAGATGTCGCTCACGCCCAAGGGCTACGACGGCATCGGCGCGCTCAACTGGCTGGCCTTCAACACCGCGAAGAAGCCGCTGTCCGACGTGCAGGTGCGCAAGGCCATTGCCACGGCCATCGACAAGAACTTCATCACCAAGGCGCTGATGGGCGGCTTCGCCACCGTGTCCGACGGCCCGCTGGTGGCCAGCAGCCCGTTTGCCGTGCCCGACCTGGTGCGCTACCCGCTCGACCTGAAGAAGGCCGGAGAAATGCTCGATGCCGCCGGCTACAAGGCCGGCGCCGGCGGCGAGCGCTTCAAGCTCACCATCGACTACCTGCCGGGCGTGGACGACCAGCAGAAGAACGTGGCCGAGTACATCCGCGGCCAGCTCAAGAAGGTGGGCATCACGGTGGAAGTGCGCGCCTCGGCCGACTTCCCGGCCTGGGCCAAGCGGCTGGCCTCGCACGACTTCGACATGTCGATGGACACGGTGTTCAACTGGGGCGACCCGATCATCGGCGTGCACCGCACCTATCTGTCGACCAACATCAAGCCCATCGTCTGGACCAACACCCAGTCGTATGCCAACCCGAAGGTGGACGAGTTGCTCAACACCGCCGGCGGCCTGATCGATGCGACGCAGCGCAAGGCCTACTACGCCACCTTCCAGAAGATCGTGACCGACGAGCTGCCCATCGAGTTCATCAACCAGGTGCCCTACCACACCGTCTCCAGCAAGAAGGTGGCCAACGTGCCAACCACCATCTGGGGACCGCTGTCGCCGCTGGACGAGGTGTACTTCAAGTAA
PROTEIN sequence
Length: 538
MPIRVPELPVFSRRATLLSASFAAAGTLLPLSVFAAAEPKRGGTLVIGSTQTPRHLNGAVQSGIATAMPSTQIFASPLRFDDKWNPQPYLAESWKLADDGKSLTLKLRKDALFHDGKPVTSADVAFSILAIKANHPFTTMMGPVEKVDTPDAYTAVVRMSVPHPAIVLAMSPALCPILPKHIYGDGQDLKNHPRNTTDVIGSGPYRVTDFKPAQRVVLERFDKFFIPGRPYLDKIIINITPDSASLMLGLERGDIQMVPFATLPTDLKRLANDPKMSLTPKGYDGIGALNWLAFNTAKKPLSDVQVRKAIATAIDKNFITKALMGGFATVSDGPLVASSPFAVPDLVRYPLDLKKAGEMLDAAGYKAGAGGERFKLTIDYLPGVDDQQKNVAEYIRGQLKKVGITVEVRASADFPAWAKRLASHDFDMSMDTVFNWGDPIIGVHRTYLSTNIKPIVWTNTQSYANPKVDELLNTAGGLIDATQRKAYYATFQKIVTDELPIEFINQVPYHTVSSKKVANVPTTIWGPLSPLDEVYFK*