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SCNpilot_cont_300_bf_scaffold_403_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 21282..22817

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VB72_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 512.0
  • Bit_score: 998
  • Evalue 3.10e-288
Variovorax paradoxus strain MEDvA23 contig_80, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22977.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 510.0
  • Bit_score: 1002
  • Evalue 3.00e-289
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 512.0
  • Bit_score: 998
  • Evalue 9.60e-289

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1536
ATGCCCAACCCGCGAGCCACCCAATGGGCGCAGCTCTTCGCGCTGCCCGACCAGCCGGCCTTGCCCCTGCAGGCCCGCTTGCGGTCCGCGGTGGTGCAGGCCATTCTTGAAGAGCACCTGAGCCCCGGCGCTCCGCTGCCGTCGTCGCGCGAACTGGCCGCGCTGCTGGGGCTGAGCCGCAACACCGTCACCTCGGCATACCTGCAACTGATCGACGAAGGCTTCCTGGAAGCGCGCCCGCGCAGCGGCGTGTTCGTGGCACGCAATGCGCGGCCGCTGTCCGCGCCGCATGCGGAGCCGCTGGTGGGGCGCAGCGGCCAGGCCAGCCAGCCGCCCGACTGGCAGGGTCGCGTGCTGCGCTCGCTGGTCGACAAACCCACGCTGTCGAAACCCGACCGCTGGCGCGACTATCCGTACCCTTTCGTCTACGGCAACTACGACCCGCAGCTCTTTCCCACCGAGGACTTTCGCGAATGCTGCGCGCGCAGCCTGGCGCGTTCGCAACTGCCGCACTGGACGCCGGACTTCGAGACCGACGACGTGCCCGACCTCATCGAGCAGATCCGCACGCGCCTGTTGCCCAAGCGCGGCGTGTTCGCGCTGAAGGAAGAGATCCTCGTGACCATGGGCGCGCAGCATGCCTACTACCTGCTGGCCGAGGCGCTGTTCGACGAGCAGACGCGCGTGGGCCTGGAAGAGCCGGGGCATCCGCATGCGCGCAACAGCTTTTCATTGCGGCAGCCGAAGTGGGTGGAGGTCGATGTCGACGAAGACGGGCTGGTCGTCGATGCGCTGCCCGCTGCCGACTACCTGTTCGTCACGCCCTCGCACCAGAGCCCGACCACCGCGACGCTGAGCCTGGAGCGGCGCCAGTGGCTGCTGCGCAAGGCGGAGCTGCAGGACTTCGTGATCATCGAGGACGACTACGAGGCGGAGAACCTGTACGAAGGCACGCCCATGCCCGCGCTCAAGAGCCTGGACAAGACCGGACGGGTGATCTACGTGGGCTCTGTGTCCAAGAGCCTGTCGCCCGCGTTGCGGCTGGGGTTCATCGTGGCGCCGCGGGCGCTCATCAAGGAACTGCGGGTGATCCGGCATGCGATGGTGCGGCACCCGAGCGCATTCCTGCAGCATGCGTATGCGCTGTTTCTTTCGCTGGGGCACCATGAGTCGCATGCGCGTCGGGTGAACCACGCCATGCAGGAGCGGCTTGCGCTGGCCGCGCAGGCGCTGCGGGACCATCTGCCCGACTTCGAGTTCCGGCTGCCTTCCGGTGGGGCTTCGATCTGGGTGCAGGCGCCTACCTGGGTGGATGCGACGGAGCTGTCCTTGATGGCGCGCAATCACGGCGTGCTGATCGAAGCGGGGGACGTGTTCTTCGCGCGGCCTCCCTATCCGTGTCCGTTCTTCCGGCTGCGGTTGTCGTCCATTGCGGCTTCGCAGATTCCGGCGGGCATCCGGGCCTTGGGCATGGCGGTTGAAGAGCTGGCCCTGGCGCGCGGCGAGAAGAGACCTGCCGGCGGACGGACGCACTGA
PROTEIN sequence
Length: 512
MPNPRATQWAQLFALPDQPALPLQARLRSAVVQAILEEHLSPGAPLPSSRELAALLGLSRNTVTSAYLQLIDEGFLEARPRSGVFVARNARPLSAPHAEPLVGRSGQASQPPDWQGRVLRSLVDKPTLSKPDRWRDYPYPFVYGNYDPQLFPTEDFRECCARSLARSQLPHWTPDFETDDVPDLIEQIRTRLLPKRGVFALKEEILVTMGAQHAYYLLAEALFDEQTRVGLEEPGHPHARNSFSLRQPKWVEVDVDEDGLVVDALPAADYLFVTPSHQSPTTATLSLERRQWLLRKAELQDFVIIEDDYEAENLYEGTPMPALKSLDKTGRVIYVGSVSKSLSPALRLGFIVAPRALIKELRVIRHAMVRHPSAFLQHAYALFLSLGHHESHARRVNHAMQERLALAAQALRDHLPDFEFRLPSGGASIWVQAPTWVDATELSLMARNHGVLIEAGDVFFARPPYPCPFFRLRLSSIAASQIPAGIRALGMAVEELALARGEKRPAGGRTH*