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SCNpilot_cont_300_bf_scaffold_403_curated_22

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 24840..25736

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VB68_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 294.0
  • Bit_score: 559
  • Evalue 2.10e-156
Variovorax paradoxus strain MEDvA23 contig_97, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20481.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 294.0
  • Bit_score: 562
  • Evalue 3.50e-157
binding-protein-dependent transport systems inner membrane component; K15552 taurine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 294.0
  • Bit_score: 559
  • Evalue 6.70e-157

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGCATGAGGTCGTCACTGTCGCATCGCCCGCCGCCGTCATGACGCAGCCGCCGCCATCCAAGCCCGCCGCGCCGCCCGCTCCCGCAGTGGCCGGCGCCAAGCTCAAGACCAGCGCCTTCAAGGTGCCGGGCGAGGGGTCGAGCGTGACCATCAGCGTGGTCACGGTGGTGGCGCTGGTGGCGCTGTGGTTCATTGTCACCAACATGGGCTGGGTCAAGCCGCTCTTCCTGCCCACGCCGCAGGCGGTGTTCCAGCAGTTCTACGAATACCTTACCGGCCAGGCCAACGACAAGCCGCTGTGGCAGCACTTCCTGGCGAGCATGTTCCGCGTGTTCTCGGCCTTCTTCCTGGCATGCGCCACAGCCATTCCGGTGGGCATTGCCATGGGCATGAGCCGCTTCTGGCGCGGCATCTTCGATCCGCCGCTGGAGTTCTATCGGCCGCTGCCGCCGCTGGCCTACCTGCCGCTCATCATCATCTGGTTCGGCATCGACGAACTGCCGAAGGTGCTGCTGATCTTCCTGAGCTGCTTCGCGCCGCTGGCGCTGGCCGCGCGCTCGGGCATGCGCAGCGCTTCACAGGAGCAGATCAACGCCGCGTACTCGATGGGCGCGAGCTACATGCAGGTGATCCGCCATGTGATTCTGCCGTCGGCGTTGCCCGACATCCTGGTGGGCATGCGCATCGCCATCGGCTTCGGATGGACCACGCTGGTGGCCGCAGAAATGGTGGCGGCCAACATGGGGCTGGGTCAGATGGTGCTGAACGCGTCGAACTTCCTGCGCACCGACATCGTCATCATGGGCATCATCGTCATTGGCGTGGTGGCTTACCTGTTCGACTTGCTGATGCGGTGGCTCGAGCGACGTCTTGTGCCCTGGAAAGGGCGCATGTAG
PROTEIN sequence
Length: 299
MHEVVTVASPAAVMTQPPPSKPAAPPAPAVAGAKLKTSAFKVPGEGSSVTISVVTVVALVALWFIVTNMGWVKPLFLPTPQAVFQQFYEYLTGQANDKPLWQHFLASMFRVFSAFFLACATAIPVGIAMGMSRFWRGIFDPPLEFYRPLPPLAYLPLIIIWFGIDELPKVLLIFLSCFAPLALAARSGMRSASQEQINAAYSMGASYMQVIRHVILPSALPDILVGMRIAIGFGWTTLVAAEMVAANMGLGQMVLNASNFLRTDIVIMGIIVIGVVAYLFDLLMRWLERRLVPWKGRM*