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SCNpilot_cont_300_bf_scaffold_403_curated_32

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 34656..35465

Top 3 Functional Annotations

Value Algorithm Source
Flagella basal body P-ring formation protein FlgA n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN8_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 269.0
  • Bit_score: 349
  • Evalue 2.30e-93
flagella basal body P-ring formation protein FlgA; K02386 flagella basal body P-ring formation protein FlgA similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 269.0
  • Bit_score: 349
  • Evalue 7.20e-94
Flagella basal body P-ring formation protein FlgA {ECO:0000313|EMBL:ACS18894.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 269.0
  • Bit_score: 349
  • Evalue 3.20e-93

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
GTGGACCGCGACACGCTGTCGCGCTGGGTGGCCGGCCGCAGTGGGCTGCAGTTCGCGCGAGGCGAGGCAACCGTCGCGAGCGAGCGCGCGCCCATTCTTCGCTGGACGGGAGCCAGCGAAACGGAAATCGAGAGCGAAGCGCAGCAACTGCAGGGGGAAGCGGTCGTCGAAGCGGCAAGAGCGTCGCTGACGGCATGGTTGTCTCAGCGCAGCGTACGCGCCGAGGTGCAGGCACTCTCGCCCACGCGCGATCTGATGCTGCCTGCGGGCACACCCGTGCTGCGGGTGCGCCCGCTGAGTGATCAGGCGCAACCCGCCCGGCGCATGCTGGTGTGGGTGGATGCATGGGTGGACAACCGGTTCGTGCGCACCACCGCCGTGAGTTTCGAGGTCGGCGCGTGGGCACCGATGACAGTGGCCACGCGCGGTGTCGATCGAGGGACGACGCTGGATCCAGCGTTGCTGCGCGATGTCACCGAGTCCAGGGACGTGGATCTCACGACGCTTCGAAACGCCAAGCCGTTGGCTGGCGTGCGCGAAGCTGAACTGGATGCGGGCTCTCAACGGCTGCGTCGGCCGCTGCGCGCCGGGGAGGTGCTTACCGAGGCGCATCTGGAAGCCGCGCCCGCCGTTGTGCGCGGGCAGCCTGCGCACCTGCTGGCGCGCAGCGGTGAGGTGTCGGTGGAAAGCCGCGTCGAGGTGCTGCAGGATGGCCGGCAAGGGCAGGTCGTGCGGGTCAAGGTGCCCGGCGCCAGCGGTGAAGTACTCGCGCGTGTCACAGGACCTGGCCAGGTCGAGGTGCAGCCATGA
PROTEIN sequence
Length: 270
VDRDTLSRWVAGRSGLQFARGEATVASERAPILRWTGASETEIESEAQQLQGEAVVEAARASLTAWLSQRSVRAEVQALSPTRDLMLPAGTPVLRVRPLSDQAQPARRMLVWVDAWVDNRFVRTTAVSFEVGAWAPMTVATRGVDRGTTLDPALLRDVTESRDVDLTTLRNAKPLAGVREAELDAGSQRLRRPLRAGEVLTEAHLEAAPAVVRGQPAHLLARSGEVSVESRVEVLQDGRQGQVVRVKVPGASGEVLARVTGPGQVEVQP*